Literature DB >> 16946478

Cloning, expression, purification, crystallization and preliminary X-ray analysis of peptidyl-tRNA hydrolase from Mycobacterium tuberculosis.

M Selvaraj1, N S Singh, Siddhartha Roy, R Sangeetha, Umesh Varshney, M Vijayan.   

Abstract

Peptidyl-tRNA hydrolase catalyses the cleavage of the ester link between the peptide and the tRNA in peptidyl-tRNAs that, for various reasons, have dropped off the translating ribosomes. This enzyme from Mycobacterium tuberculosis has been crystallized in three related but distinct forms: P2(1)2(1)2(1), unit-cell parameters a = 36.30, b = 61.85, c = 73.97 A, P2(1), a = 35.83, b = 73.79, c = 59.79 A, beta = 92.3 degrees , and P2(1)2(1)2(1), a = 35.84, b = 57.06, c = 72.59 A. X-ray data have been collected from all three forms.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16946478      PMCID: PMC2242860          DOI: 10.1107/S1744309106031125

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  11 in total

1.  Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation.

Authors:  S Datta; M M Prabu; M B Vaze; N Ganesh; N R Chandra; K Muniyappa; M Vijayan
Journal:  Nucleic Acids Res       Date:  2000-12-15       Impact factor: 16.971

2.  Origins of minigene-dependent growth inhibition in bacterial cells.

Authors:  V Heurgué-Hamard; V Dinçbas; R H Buckingham; M Ehrenberg
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

3.  Structure of Mycobacterium tuberculosis single-stranded DNA-binding protein. Variability in quaternary structure and its implications.

Authors:  K Saikrishnan; J Jeyakanthan; J Venkatesh; N Acharya; K Sekar; U Varshney; M Vijayan
Journal:  J Mol Biol       Date:  2003-08-08       Impact factor: 5.469

Review 4.  Peptidyl-tRNA hydrolase and its critical role in protein biosynthesis.

Authors:  Gautam Das; Umesh Varshney
Journal:  Microbiology       Date:  2006-08       Impact factor: 2.777

5.  Enzymatic hydrolysis of N-substituted aminoacyl-tRNA.

Authors:  F Cuzin; N Kretchmer; R E Greenberg; R Hurwitz; F Chapeville
Journal:  Proc Natl Acad Sci U S A       Date:  1967-11       Impact factor: 11.205

6.  Enzymatic hydrolysis of N-substituted aminoacyl transfer ribonucleic acid in yeast.

Authors:  J P Jost; R M Bock
Journal:  J Biol Chem       Date:  1969-11-10       Impact factor: 5.157

7.  Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.

Authors:  Satyabrata Das; Parimal Kumar; Vikrant Bhor; A Surolia; M Vijayan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-05-12

8.  X-ray structural studies of Mycobacterium tuberculosis RRF and a comparative study of RRFs of known structure. Molecular plasticity and biological implications.

Authors:  K Saikrishnan; S K Kalapala; U Varshney; M Vijayan
Journal:  J Mol Biol       Date:  2005-01-07       Impact factor: 5.469

9.  X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules.

Authors:  Siddhartha Roy; Surbhi Gupta; Satyabrata Das; K Sekar; Dipankar Chatterji; M Vijayan
Journal:  J Mol Biol       Date:  2004-06-18       Impact factor: 5.469

10.  Crystallographic identification of an ordered C-terminal domain and a second nucleotide-binding site in RecA: new insights into allostery.

Authors:  R Krishna; G P Manjunath; P Kumar; A Surolia; Nagasuma R Chandra; K Muniyappa; M Vijayan
Journal:  Nucleic Acids Res       Date:  2006-04-28       Impact factor: 16.971

View more
  4 in total

1.  Overexpression, purification, crystallization and preliminary X-ray analysis of uracil N-glycosylase from Mycobacterium tuberculosis in complex with a proteinaceous inhibitor.

Authors:  Prem Singh; Ramappa K Talawar; P D V Krishna; Umesh Varshney; M Vijayan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-11-30

2.  Crowding, molecular volume and plasticity: an assessment involving crystallography, NMR and simulations.

Authors:  M Selvaraj; Rais Ahmad; Umesh Varshney; M Vijayan
Journal:  J Biosci       Date:  2012-12       Impact factor: 1.826

3.  Structures of new crystal forms of Mycobacterium tuberculosis peptidyl-tRNA hydrolase and functionally important plasticity of the molecule.

Authors:  M Selvaraj; Rais Ahmad; Umesh Varshney; M Vijayan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-21

4.  Natural Product Inhibition and Enzyme Kinetics Related to Phylogenetic Characterization for Bacterial Peptidyl-tRNA Hydrolase 1.

Authors:  D Scott Strange; Steven S Gaffin; W Blake Holloway; Meredyth D Kinsella; Jacob N Wisotsky; Hana McFeeters; Robert L McFeeters
Journal:  Molecules       Date:  2021-04-15       Impact factor: 4.411

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.