Literature DB >> 16938467

Atomic resolution structures in nuclear transport.

Katherine E Süel1, Ahmet E Cansizoglu, Yuh Min Chook.   

Abstract

There are currently at least 53 structures of components of nuclear transport in the Protein Databank. In addition to providing critical insights into molecular mechanisms of nuclear transport, these atomic resolution structures provide a large body of information that could guide biochemical and cell biological analyses involving nuclear transport proteins. This paper catalogs 53 crystal and NMR structures of nuclear transport proteins, with the emphasis on providing information useful for mutagenesis and overexpression of recombinant proteins.

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Year:  2006        PMID: 16938467      PMCID: PMC3471385          DOI: 10.1016/j.ymeth.2006.06.015

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  54 in total

1.  GLFG and FxFG nucleoporins bind to overlapping sites on importin-beta.

Authors:  Richard Bayliss; Trevor Littlewood; Lisa A Strawn; Susan R Wente; Murray Stewart
Journal:  J Biol Chem       Date:  2002-10-07       Impact factor: 5.157

2.  Role of flanking sequences and phosphorylation in the recognition of the simian-virus-40 large T-antigen nuclear localization sequences by importin-alpha.

Authors:  Marcos R M Fontes; Trazel Teh; Gabor Toth; Anna John; Imre Pavo; David A Jans; Bostjan Kobe
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

3.  Structural basis for Nup2p function in cargo release and karyopherin recycling in nuclear import.

Authors:  Yoshiyuki Matsuura; Allison Lange; Michelle T Harreman; Anita H Corbett; Murray Stewart
Journal:  EMBO J       Date:  2003-10-15       Impact factor: 11.598

4.  Structural basis for the interaction between the Tap/NXF1 UBA domain and FG nucleoporins at 1A resolution.

Authors:  Richard P Grant; David Neuhaus; Murray Stewart
Journal:  J Mol Biol       Date:  2003-02-21       Impact factor: 5.469

5.  Synergy of silent and hot spot mutations in importin beta reveals a dynamic mechanism for recognition of a nuclear localization signal.

Authors:  Carolin Koerner; Tinglu Guan; Larry Gerace; Gino Cingolani
Journal:  J Biol Chem       Date:  2003-02-19       Impact factor: 5.157

6.  Structural similarity in the absence of sequence homology of the messenger RNA export factors Mtr2 and p15.

Authors:  Sébastien Fribourg; Elena Conti
Journal:  EMBO Rep       Date:  2003-07       Impact factor: 8.807

7.  Structural basis for the specificity of bipartite nuclear localization sequence binding by importin-alpha.

Authors:  Marcos R M Fontes; Trazel Teh; David Jans; Ross I Brinkworth; Bostjan Kobe
Journal:  J Biol Chem       Date:  2003-04-14       Impact factor: 5.157

8.  Molecular basis for the recognition of a nonclassical nuclear localization signal by importin beta.

Authors:  Gino Cingolani; Janna Bednenko; Matthew T Gillespie; Larry Gerace
Journal:  Mol Cell       Date:  2002-12       Impact factor: 17.970

9.  The three-dimensional structure of the autoproteolytic, nuclear pore-targeting domain of the human nucleoporin Nup98.

Authors:  Alec E Hodel; Mary R Hodel; Eric R Griffis; Krista A Hennig; Gary A Ratner; Songli Xu; Maureen A Powers
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

10.  Structural basis for the interaction between NTF2 and nucleoporin FxFG repeats.

Authors:  Richard Bayliss; Sara W Leung; Rosanna P Baker; B Booth Quimby; Anita H Corbett; Murray Stewart
Journal:  EMBO J       Date:  2002-06-17       Impact factor: 11.598

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  13 in total

1.  Structural and energetic basis of ALS-causing mutations in the atypical proline-tyrosine nuclear localization signal of the Fused in Sarcoma protein (FUS).

Authors:  Zi Chao Zhang; Yuh Min Chook
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-09       Impact factor: 11.205

2.  Crystallization of the flexible nuclear import receptor importin-beta in the unliganded state.

Authors:  Noelia Roman; Brenda Kirkby; Mary Marfori; Bostjan Kobe; Jade K Forwood
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-05-22

3.  Conformational selection in the recognition of the snurportin importin beta binding domain by importin beta.

Authors:  Anshul Bhardwaj; Gino Cingolani
Journal:  Biochemistry       Date:  2010-06-22       Impact factor: 3.162

4.  Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex.

Authors:  Thomas Boehmer; Sandra Jeudy; Ian C Berke; Thomas U Schwartz
Journal:  Mol Cell       Date:  2008-06-20       Impact factor: 17.970

5.  The importin beta binding domain modulates the avidity of importin beta for the nuclear pore complex.

Authors:  Kaylen Lott; Anshul Bhardwaj; Gregory Mitrousis; Nelly Pante; Gino Cingolani
Journal:  J Biol Chem       Date:  2010-03-01       Impact factor: 5.157

Review 6.  The Structure Inventory of the Nuclear Pore Complex.

Authors:  Thomas U Schwartz
Journal:  J Mol Biol       Date:  2016-03-22       Impact factor: 5.469

Review 7.  A jumbo problem: mapping the structure and functions of the nuclear pore complex.

Authors:  Javier Fernandez-Martinez; Michael P Rout
Journal:  Curr Opin Cell Biol       Date:  2012-02-08       Impact factor: 8.382

8.  The isolated C-terminal nuclear localization sequence of the breast cancer metastasis suppressor 1 is disordered.

Authors:  David Pantoja-Uceda; José L Neira; Lellys M Contreras; Christa A Manton; Danny R Welch; Bruno Rizzuti
Journal:  Arch Biochem Biophys       Date:  2019-01-30       Impact factor: 4.013

Review 9.  Nuclear import by karyopherin-βs: recognition and inhibition.

Authors:  Yuh Min Chook; Katherine E Süel
Journal:  Biochim Biophys Acta       Date:  2010-10-26

10.  Structural basis for leucine-rich nuclear export signal recognition by CRM1.

Authors:  Xiuhua Dong; Anindita Biswas; Katherine E Süel; Laurie K Jackson; Rita Martinez; Hongmei Gu; Yuh Min Chook
Journal:  Nature       Date:  2009-04-01       Impact factor: 49.962

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