Literature DB >> 16923880

Evolution of vitamin B2 biosynthesis: 6,7-dimethyl-8-ribityllumazine synthases of Brucella.

Vanesa Zylberman1, Sebastián Klinke, Ilka Haase, Adelbert Bacher, Markus Fischer, Fernando Alberto Goldbaum.   

Abstract

The penultimate step in the biosynthesis of riboflavin (vitamin B2) involves the condensation of 3,4-dihydroxy-2-butanone 4-phosphate with 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione, which is catalyzed by 6,7-dimethyl-8-ribityllumazine synthase (lumazine synthase). Pathogenic Brucella species adapted to an intracellular lifestyle have two genes involved in riboflavin synthesis, ribH1 and ribH2, which are located on different chromosomes. The ribH2 gene was shown previously to specify a lumazine synthase (type II lumazine synthase) with an unusual decameric structure and a very high Km for 3,4-dihydroxy-2-butanone 4-phosphate. Moreover, the protein was found to be an immunodominant Brucella antigen and was able to generate strong humoral as well as cellular immunity against Brucella abortus in mice. We have now cloned and expressed the ribH1 gene, which is located inside a small riboflavin operon, together with two other putative riboflavin biosynthesis genes and the nusB gene, specifying an antitermination factor. The RibH1 protein (type I lumazine synthase) is a homopentamer catalyzing the formation of 6,7-dimethyl-8-ribityllumazine at a rate of 18 nmol mg(-1) min(-1). Sequence comparison of lumazine synthases from archaea, bacteria, plants, and fungi suggests a family of proteins comprising archaeal lumazine and riboflavin synthases, type I lumazine synthases, and the eubacterial type II lumazine synthases.

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Year:  2006        PMID: 16923880      PMCID: PMC1595393          DOI: 10.1128/JB.00207-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  55 in total

1.  Biosynthesis of riboflavin. The reaction catalyzed by 6,7-dimethyl-8-ribityllumazine synthase can proceed without enzymatic catalysis under physiological conditions.

Authors:  K Kis; K Kugelbrey; A Bacher
Journal:  J Org Chem       Date:  2001-04-20       Impact factor: 4.354

2.  The 18-kDa cytoplasmic protein of Brucella species --an antigen useful for diagnosis--is a lumazine synthase.

Authors:  Fernando A Goldbaum; Carlos A Velikovsky; Pablo C Baldi; Simone Mörtl; Adelbert Bacher; Carlos A Fossati
Journal:  J Med Microbiol       Date:  1999-09       Impact factor: 2.472

3.  Crystal structure analysis of a pentameric fungal and an icosahedral plant lumazine synthase reveals the structural basis for differences in assembly.

Authors:  K Persson; G Schneider; D B Jordan; P V Viitanen; T Sandalova
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

4.  The genome sequence of the facultative intracellular pathogen Brucella melitensis.

Authors:  Vito G DelVecchio; Vinayak Kapatral; Rajendra J Redkar; Guy Patra; Cesar Mujer; Tamara Los; Natalia Ivanova; Iain Anderson; Anamitra Bhattacharyya; Athanasios Lykidis; Gary Reznik; Lynn Jablonski; Niels Larsen; Mark D'Souza; Axel Bernal; Mikhail Mazur; Eugene Goltsman; Eugene Selkov; Philip H Elzer; Sue Hagius; David O'Callaghan; Jean-Jacques Letesson; Robert Haselkorn; Nikos Kyrpides; Ross Overbeek
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-26       Impact factor: 11.205

5.  X-ray structure analysis and crystallographic refinement of lumazine synthase from the hyperthermophile Aquifex aeolicus at 1.6 A resolution: determinants of thermostability revealed from structural comparisons.

Authors:  X Zhang; W Meining; M Fischer; A Bacher; R Ladenstein
Journal:  J Mol Biol       Date:  2001-03-09       Impact factor: 5.469

6.  Cloning, expression, purification and crystallization of dihydroxybutanone phosphate synthase from Magnaporthe grisea.

Authors:  D I Liao; P V Viitanen; D B Jordan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-11

7.  Plant riboflavin biosynthesis. Cloning, chloroplast localization, expression, purification, and partial characterization of spinach lumazine synthase.

Authors:  D B Jordan; K O Bacot; T J Carlson; M Kessel; P V Viitanen
Journal:  J Biol Chem       Date:  1999-07-30       Impact factor: 5.157

Review 8.  The chemical and biological versatility of riboflavin.

Authors:  V Massey
Journal:  Biochem Soc Trans       Date:  2000       Impact factor: 5.407

9.  Biosynthesis of riboflavin: 6,7-dimethyl-8-ribityllumazine synthase of Schizosaccharomyces pombe.

Authors:  Markus Fischer; Ilka Haase; Richard Feicht; Gerald Richter; Stefan Gerhardt; Jean-Pierre Changeux; Robert Huber; Adelbert Bacher
Journal:  Eur J Biochem       Date:  2002-01

10.  The atomic structure of pentameric lumazine synthase from Saccharomyces cerevisiae at 1.85 A resolution reveals the binding mode of a phosphonate intermediate analogue.

Authors:  W Meining; S Mörtl; M Fischer; M Cushman; A Bacher; R Ladenstein
Journal:  J Mol Biol       Date:  2000-05-26       Impact factor: 5.469

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  9 in total

Review 1.  Genetic control of biosynthesis and transport of riboflavin and flavin nucleotides and construction of robust biotechnological producers.

Authors:  Charles A Abbas; Andriy A Sibirny
Journal:  Microbiol Mol Biol Rev       Date:  2011-06       Impact factor: 11.056

2.  Proteomics-based confirmation of protein expression and correction of annotation errors in the Brucella abortus genome.

Authors:  Julie Lamontagne; Maxime Béland; Anik Forest; Alexandra Côté-Martin; Najib Nassif; Fadi Tomaki; Ignacio Moriyón; Edgardo Moreno; Eustache Paramithiotis
Journal:  BMC Genomics       Date:  2010-05-12       Impact factor: 3.969

3.  An atypical riboflavin pathway is essential for Brucella abortus virulence.

Authors:  Hernán Ruy Bonomi; María Inés Marchesini; Sebastián Klinke; Juan E Ugalde; Vanesa Zylberman; Rodolfo A Ugalde; Diego J Comerci; Fernando Alberto Goldbaum
Journal:  PLoS One       Date:  2010-02-25       Impact factor: 3.240

4.  Identification and characterization of RibN, a novel family of riboflavin transporters from Rhizobium leguminosarum and other proteobacteria.

Authors:  Víctor A García Angulo; Hernán R Bonomi; Diana M Posadas; María I Serer; Alfredo G Torres; Ángeles Zorreguieta; Fernando A Goldbaum
Journal:  J Bacteriol       Date:  2013-08-09       Impact factor: 3.490

Review 5.  Biological Properties of Vitamins of the B-Complex, Part 1: Vitamins B1, B2, B3, and B5.

Authors:  Marcel Hrubša; Tomáš Siatka; Iveta Nejmanová; Marie Vopršalová; Lenka Kujovská Krčmová; Kateřina Matoušová; Lenka Javorská; Kateřina Macáková; Laura Mercolini; Fernando Remião; Marek Máťuš; Přemysl Mladěnka
Journal:  Nutrients       Date:  2022-01-22       Impact factor: 5.717

Review 6.  Why flavins are not competitors of chlorophyll in the evolution of biological converters of solar energy.

Authors:  Mikhail S Kritsky; Taisiya A Telegina; Yulia L Vechtomova; Andrey A Buglak
Journal:  Int J Mol Sci       Date:  2012-12-27       Impact factor: 5.923

7.  Multi-tissue metabolomic profiling reveals potential mechanisms of cocoon yield in silkworms (Bombyx mori) fed formula feed versus mulberry leaves.

Authors:  Xuehui Wu; Xuedong Chen; Aihong Ye; Jinru Cao; Ruimin He; Meiliang Pan; Feng Jin; Huanyan Ma; Wenlin Zhou
Journal:  Front Mol Biosci       Date:  2022-08-17

8.  Asymmetric bifunctional protein nanoparticles through redesign of self-assembly.

Authors:  Santiago Sosa; Andrés H Rossi; Alan M Szalai; Sebastián Klinke; Jimena Rinaldi; Ana Farias; Paula M Berguer; Alejandro D Nadra; Fernando D Stefani; Fernando A Goldbaum; Hernán R Bonomi
Journal:  Nanoscale Adv       Date:  2019-02-21

9.  Vitamin B2 as a virulence factor in Pseudogymnoascus destructans skin infection.

Authors:  Miroslav Flieger; Hana Bandouchova; Jan Cerny; Milada Chudíčková; Miroslav Kolarik; Veronika Kovacova; Natália Martínková; Petr Novák; Ondřej Šebesta; Eva Stodůlková; Jiri Pikula
Journal:  Sci Rep       Date:  2016-09-13       Impact factor: 4.379

  9 in total

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