Literature DB >> 9733753

Mechanisms of spectral tuning in blue cone visual pigments. Visible and raman spectroscopy of blue-shifted rhodopsin mutants.

S W Lin1, G G Kochendoerfer, K S Carroll, D Wang, R A Mathies, T P Sakmar.   

Abstract

Spectral tuning by visual pigments involves the modulation of the physical properties of the chromophore (11-cis-retinal) by amino acid side chains that compose the chromophore-binding pocket. We identified 12 amino acid residues in the human blue cone pigment that might induce the required green-to-blue opsin shift. The simultaneous substitution of nine of these sites in rhodopsin (M86L, G90S, A117G, E122L, A124T, W265Y, A292S, A295S, and A299C) shifted the absorption maximum from 500 to 438 nm, accounting for 2,830 cm-1, or 80%, of the opsin shift between rhodopsin and the blue cone pigment. Raman spectroscopy of mutant pigments shows that the dielectric character and architecture of the chromophore-binding pocket are specifically altered. An increase in the number of dipolar side chains near the protonated Schiff base of retinal increases the ground-excited state energy gap via long range dipole-dipole Coulomb interaction. In addition, the W265Y substitution causes a decrease in solvent polarizability near the chromophore ring structure. Finally, two substitutions on transmembrane helix 3 (A117G and E122L) act in combination with the other substitutions to alter the binding-pocket structure, resulting in stronger interaction of the protonated Schiff base group with the surrounding dipolar groups and the counterion. Taken together, these results identify the amino acid side chains and the underlying physical mechanisms responsible for a majority of the opsin shift in blue visual pigments.

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Year:  1998        PMID: 9733753     DOI: 10.1074/jbc.273.38.24583

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

1.  Ultraviolet pigments in birds evolved from violet pigments by a single amino acid change.

Authors:  S Yokoyama; F B Radlwimmer; N S Blow
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

2.  Spectral tuning in salamander visual pigments studied with dihydroretinal chromophores.

Authors:  C L Makino; M Groesbeek; J Lugtenburg; D A Baylor
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

3.  Molecular genetics and the evolution of ultraviolet vision in vertebrates.

Authors:  Y Shi; F B Radlwimmer; S Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

4.  Diversification and spectral tuning in marine proteorhodopsins.

Authors:  Dikla Man; Weiwu Wang; Gazalah Sabehi; L Aravind; Anton F Post; Ramon Massana; Elena N Spudich; John L Spudich; Oded Béjà
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

5.  Color vision: "OH-site" rule for seeing red and green.

Authors:  Sivakumar Sekharan; Kota Katayama; Hideki Kandori; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2012-06-18       Impact factor: 15.419

6.  Molecular basis for ultraviolet vision in invertebrates.

Authors:  Ernesto Salcedo; Lijun Zheng; Meridee Phistry; Eve E Bagg; Steven G Britt
Journal:  J Neurosci       Date:  2003-11-26       Impact factor: 6.167

7.  Evolutionary analysis of rhodopsin and cone pigments: connecting the three-dimensional structure with spectral tuning and signal transfer.

Authors:  David C Teller; Ronald E Stenkamp; Krzysztof Palczewski
Journal:  FEBS Lett       Date:  2003-11-27       Impact factor: 4.124

8.  Structure and function in rhodopsin: kinetic studies of retinal binding to purified opsin mutants in defined phospholipid-detergent mixtures serve as probes of the retinal binding pocket.

Authors:  P J Reeves; J Hwa; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-02       Impact factor: 11.205

9.  Assembling a Correctly Folded and Functional Heptahelical Membrane Protein by Protein Trans-splicing.

Authors:  Michaela Mehler; Carl Elias Eckert; Alena Busche; Jennifer Kulhei; Jonas Michaelis; Johanna Becker-Baldus; Josef Wachtveitl; Volker Dötsch; Clemens Glaubitz
Journal:  J Biol Chem       Date:  2015-09-24       Impact factor: 5.157

10.  A comparative study of rhodopsin function in the great bowerbird (Ptilonorhynchus nuchalis): Spectral tuning and light-activated kinetics.

Authors:  Ilke van Hazel; Sarah Z Dungan; Frances E Hauser; James M Morrow; John A Endler; Belinda S W Chang
Journal:  Protein Sci       Date:  2016-03-04       Impact factor: 6.725

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