Literature DB >> 16902020

Pedobacter aquatilis sp. nov., isolated from drinking water, and emended description of the genus Pedobacter.

Virginia Gallego1, Maria Teresa García1, Antonio Ventosa1.   

Abstract

A Gram-negative, rod-shaped, non-spore-forming bacterium (strain AR107(T)) was isolated from the drinking water distribution system of Seville (Spain). A polyphasic taxonomic study of the isolate resulted in its identification as a member of the genus Pedobacter. On the basis of 16S rRNA gene sequence comparisons, strain AR107(T) was shown to belong to the phylum Bacteroidetes, being related to members of the genus Pedobacter. It showed 95.2 % sequence similarity with respect to the type strains of Pedobacter heparinus and Pedobacter piscium, and 94.1 % similarity with respect to the type strain of Pedobacter himalayensis. The predominant fatty acids were iso-C(15 : 0), iso-C(17 : 0) 3-OH and summed feature 3 (iso-C(15 : 0) 2-OH and/or C(16 : 1)omega7c), which supports the affiliation of strain AR107(T) to the genus Pedobacter. The DNA G+C content of this strain was 38 mol%. On the basis of the phenotypic, phylogenetic and genotypic results, strain AR107(T) represents a novel species, for which the name Pedobacter aquatilis sp. nov. is proposed. The type strain is AR107(T) (=CCM 7347(T)=CECT 7114(T)=JCM 13454(T)).

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Year:  2006        PMID: 16902020     DOI: 10.1099/ijs.0.64176-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

1.  Pedobacter aquicola sp. nov., isolated from freshwater.

Authors:  Yochan Joung; Hye-Jin Jang; Miri Park; Jaeho Song; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2018-06-14       Impact factor: 3.422

2.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

3.  Genome sequence of Pedobacter arcticus sp. nov., a sea ice bacterium isolated from tundra soil.

Authors:  Ye Yin; Guidong Yue; Qiang Gao; Zhiyong Wang; Fang Peng; Chengxiang Fang; Xu Yang; Li Pan
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

4.  Pedobacter yonginense sp. nov., isolated from a mesotrophic artificial Lake in Korea.

Authors:  Yochan Joung; Hanuel Kim; Kiseong Joh
Journal:  J Microbiol       Date:  2010-08-20       Impact factor: 3.422

5.  Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water.

Authors:  Le Tran Tien Chau; Yong-Seok Kim; Chang-Jun Cha
Journal:  Antonie Van Leeuwenhoek       Date:  2022-02-06       Impact factor: 2.271

6.  Pedobacter namyangjuensis sp. nov. isolated from soil and reclassification of Nubsella zeaxanthinifaciens Asker et al. 2008 as Pedobacter zeaxanthinifaciens comb. nov.

Authors:  Dong-Uk Kim; Yoo-Jeong Kim; Dong-Hyeon Shin; Hang-Yeon Weon; Soon-Wo Kwon; Chi-Nam Seong; Jong-Ok Ka
Journal:  J Microbiol       Date:  2013-03-02       Impact factor: 3.422

7.  Pedobacter hainanensis sp. nov., isolated from seaside soil.

Authors:  Yan-yu Meng; Yun-bin Fu; Meng-yu Wang; Yong Zhao; Qi-shun Liu; Yu-guang Du
Journal:  Curr Microbiol       Date:  2013-01-13       Impact factor: 2.188

8.  Pedobacter pollutisoli sp. nov., Isolated from Tetrabromobisphenol A-Contaminated Soil.

Authors:  Yang Mu; Zhuang Ke; Chen-Xi Feng; Xiao-Wei Wang; Xiao-Wen Wang; Hong-Mei Wang; Qing Chen; Jian He
Journal:  Curr Microbiol       Date:  2019-02-13       Impact factor: 2.188

9.  Pararcticibacter amylolyticus gen. nov., sp. nov., Isolated from a Rotten Hemp Rope, and Reclassification of Pedobacter tournemirensis as Pararcticibacter tournemirensis comb. nov.

Authors:  Yu-Yuan Cai; Wei-Wei Dong; Yuan-Liang Hu; Xu Jiang; Yan-Wei Wang; Yi-Qing Zhou; Nan Peng; Yun-Xiang Liang; Shu-Miao Zhao
Journal:  Curr Microbiol       Date:  2019-12-06       Impact factor: 2.188

10.  Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113).

Authors:  Konstantinos Liolios; Johannes Sikorski; Meagan Lu; Matt Nolan; Alla Lapidus; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Marcel Huntemann; Natalia Ivanova; Ioanna Pagani; Konstantinos Mavromatis; Galina Ovchinikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Evelyne-Marie Brambilla; Oleg Kotsyurbenko; Manfred Rohde; Brian J Tindall; Birte Abt; Markus Göker; John C Detter; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2011-09-23
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