Literature DB >> 14724760

Electrostatic influence on ion transport through the alphaHL channel.

M Misakian1, J J Kasianowicz.   

Abstract

The current-voltage relationship of a single Staphylococcus aureus alpha-hemolysin (alphaHL) channel is nonlinear, rectifying, and depends on the bulk pH and the ionic strength. The data are described qualitatively by a simple one-dimensional Nernst-Planck analysis in which the fixed charges inside and near the pore's entrances affect the transport of ions through the channel. The distances of these fixed charges from one of the channel's entrances are obtained from the channel's crystal structure. The model demonstrates that rectification of monovalent ion flow through the alphaHL channel can be related to the asymmetry in the location of the ionizable amino acid side chains.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14724760     DOI: 10.1007/s00232-003-0615-1

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  45 in total

1.  A simple method for the determination of the pore radius of ion channels in planar lipid bilayer membranes.

Authors:  O V Krasilnikov; R Z Sabirov; V I Ternovsky; P G Merzliak; J N Muratkhodjaev
Journal:  FEMS Microbiol Immunol       Date:  1992-09

2.  The theory of ion transport through membrane channels.

Authors:  K Cooper; E Jakobsson; P Wolynes
Journal:  Prog Biophys Mol Biol       Date:  1985       Impact factor: 3.667

Review 3.  alpha-Hemolysin from Staphylococcus aureus: an archetype of beta-barrel, channel-forming toxins.

Authors:  E Gouaux
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

4.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

5.  Ionic channels formed by Staphylococcus aureus alpha-toxin: voltage-dependent inhibition by divalent and trivalent cations.

Authors:  G Menestrina
Journal:  J Membr Biol       Date:  1986       Impact factor: 1.843

6.  Ion transport through channels formed in lipid bilayers by Staphylococcus aureus alpha-toxin.

Authors:  O V Krasilnikov; R Z Sabirov
Journal:  Gen Physiol Biophys       Date:  1989-06       Impact factor: 1.512

7.  Distinction between dipolar and inductive effects in modulating the conductance of gramicidin channels.

Authors:  R E Koeppe; J L Mazet; O S Andersen
Journal:  Biochemistry       Date:  1990-01-16       Impact factor: 3.162

8.  Effect of pore structure on energy barriers and applied voltage profiles. II. Unsymmetrical channels.

Authors:  P C Jordan
Journal:  Biophys J       Date:  1984-06       Impact factor: 4.033

9.  Low conductance states of a single ion channel are not 'closed'.

Authors:  Y E Korchev; C L Bashford; G M Alder; J J Kasianowicz; C A Pasternak
Journal:  J Membr Biol       Date:  1995-10       Impact factor: 1.843

Review 10.  Ionic hopping defended.

Authors:  C Miller
Journal:  J Gen Physiol       Date:  1999-06       Impact factor: 4.086

View more
  24 in total

1.  Ion permeation through the alpha-hemolysin channel: theoretical studies based on Brownian dynamics and Poisson-Nernst-Plank electrodiffusion theory.

Authors:  Sergei Yu Noskov; Wonpil Im; Benoît Roux
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

2.  Polymer translocation through alpha-hemolysin pore with tunable polymer-pore electrostatic interaction.

Authors:  Chiu Tai Andrew Wong; M Muthukumar
Journal:  J Chem Phys       Date:  2010-07-28       Impact factor: 3.488

3.  Continuum electrostatic calculations of the pKa of ionizable residues in an ion channel: dynamic vs. static input structure.

Authors:  M Aguilella-Arzo; V M Aguilella
Journal:  Eur Phys J E Soft Matter       Date:  2010-04-25       Impact factor: 1.890

4.  Temperature Effect on Ionic Current and ssDNA Transport through Nanopores.

Authors:  Linda Payet; Marlène Martinho; Céline Merstorf; Manuela Pastoriza-Gallego; Juan Pelta; Virgile Viasnoff; Loïc Auvray; Murugappan Muthukumar; Jérôme Mathé
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

5.  Molecular dynamics simulation of water permeation through the alpha-hemolysin channel.

Authors:  Jirasak Wong-Ekkabut; Mikko Karttunen
Journal:  J Biol Phys       Date:  2015-08-12       Impact factor: 1.365

6.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

7.  Translocation of a heterogeneous polymer.

Authors:  Stephen Mirigian; Yanbo Wang; Murugappan Muthukumar
Journal:  J Chem Phys       Date:  2012-08-14       Impact factor: 3.488

8.  Model-based prediction of the alpha-hemolysin structure in the hexameric state.

Authors:  Simone Furini; Carmen Domene; Michele Rossi; Marco Tartagni; Silvio Cavalcanti
Journal:  Biophys J       Date:  2008-05-23       Impact factor: 4.033

9.  Excursion of a single polypeptide into a protein pore: simple physics, but complicated biology.

Authors:  Mohammad M Mohammad; Liviu Movileanu
Journal:  Eur Biophys J       Date:  2008-03-27       Impact factor: 1.733

10.  Salting out the ionic selectivity of a wide channel: the asymmetry of OmpF.

Authors:  Antonio Alcaraz; Ekaterina M Nestorovich; Marcel Aguilella-Arzo; Vicente M Aguilella; Sergey M Bezrukov
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.