Literature DB >> 16872144

Determination of the absolute configurations of natural products via density functional theory calculations of optical rotation, electronic circular dichroism, and vibrational circular dichroism: the cytotoxic sesquiterpene natural products quadrone, suberosenone, suberosanone, and suberosenol A acetate.

P J Stephens1, D M McCann, F J Devlin, A B Smith.   

Abstract

The determination of the absolute configurations (ACs) of chiral molecules using the chiroptical techniques of optical rotation (OR), electronic circular dichroism (ECD), and vibrational circular dichroism (VCD) has been revolutionized by the development of density functional theory (DFT) methods for the prediction of these properties. Here, we demonstrate the significance of these advances for the stereochemical characterization of natural products. Time-dependent DFT (TDDFT) calculations of the specific rotations, [alpha](D), of four cytotoxic natural products, quadrone (1), suberosenone (2), suberosanone (3), and suberosenol A acetate (4), are used to assign their ACs. TDDFT calculations of the ECD of 1 are used to assign its AC. The VCD spectrum of 1 is reported and also used, together with DFT calculations, to assign its AC. The ACs of 1 derived from its [alpha](D), ECD, and VCD are identical and in agreement with the AC previously determined via total synthesis. The previously undetermined ACs of 2-4, derived from their [alpha](D) values, have absolute configurations of their tricyclic cores identical to that of 1. Further studies of the ACs of these molecules using ECD and, especially, VCD are recommended to establish more definitively this finding. Our studies of the OR, ECD, and VCD of quadrone are the first to utilize DFT calculations of all three properties for the determination of the AC of a chiral natural product molecule.

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Year:  2006        PMID: 16872144     DOI: 10.1021/np060112p

Source DB:  PubMed          Journal:  J Nat Prod        ISSN: 0163-3864            Impact factor:   4.050


  6 in total

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2.  Using quantum chemical computations of NMR chemical shifts to assign relative configurations of terpenes from an engineered Streptomyces host.

Authors:  Q Nhu N Nguyen; Dean J Tantillo
Journal:  J Antibiot (Tokyo)       Date:  2016-05-18       Impact factor: 2.649

3.  Absolute configuration of actinophyllic acid as determined through chiroptical data.

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Journal:  J Nat Prod       Date:  2009-03-27       Impact factor: 4.050

4.  Determination of Absolute Configuration of Natural Products: Theoretical Calculation of Electronic Circular Dichroism as a Tool.

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Journal:  Curr Org Chem       Date:  2010-10-01       Impact factor: 2.180

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Authors:  Sonja L Knowles; Christopher D Roberts; Mario Augustinović; Laura Flores-Bocanegra; Huzefa A Raja; Kimberly N Heath-Borrero; Joanna E Burdette; Joseph O Falkinham Iii; Cedric J Pearce; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2021-03-25       Impact factor: 4.050

6.  Theoretical Prediction of Structures, Vibrational Circular Dichroism, and Infrared Spectra of Chiral Be4B8 Cluster at Different Temperatures.

Authors:  Carlos Emiliano Buelna-García; Eduardo Robles-Chaparro; Tristan Parra-Arellano; Jesus Manuel Quiroz-Castillo; Teresa Del-Castillo-Castro; Gerardo Martínez-Guajardo; Cesar Castillo-Quevedo; Aned de-León-Flores; Gilberto Anzueto-Sánchez; Martha Fabiola Martin-Del-Campo-Solis; Ana Maria Mendoza-Wilson; Alejandro Vásquez-Espinal; Jose Luis Cabellos
Journal:  Molecules       Date:  2021-06-28       Impact factor: 4.411

  6 in total

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