Literature DB >> 16866406

Activation energies of pericyclic reactions: performance of DFT, MP2, and CBS-QB3 methods for the prediction of activation barriers and reaction energetics of 1,3-dipolar cycloadditions, and revised activation enthalpies for a standard set of hydrocarbon pericyclic reactions.

Daniel H Ess1, K N Houk.   

Abstract

Activation barriers and reaction energetics for the three main classes of 1,3-dipolar cycloadditions, including nine different reactions, were evaluated with the MPW1K and B3LYP density functional methods, MP2, and the multicomponent CBS-QB3 method. The CBS-QB3 values were used as standards for 1,3-dipolar cycloaddition activation barriers and reaction energetics, and the density functional theory (DFT) and MP2 methods were benchmarked against these values. The MPW1K/6-31G* method and basis set performs best for activation barriers, with a mean absolute deviation (MAD) value of 1.1 kcal/mol. The B3LYP/6-31G* method and basis set performs best for reaction enthalpies, with a MAD value of 2.4 kcal/mol, while the MPW1K method shows large errors for reaction energetics. The MP2 method gives the expected systematic underestimation of barriers. Concerted and nearly synchronous transition structures are predicted by all DFT and MP2 methods. Also reported are revised estimated 0 K experimental activation enthalpies for a standard set of hydrocarbon pericyclic reactions and updated comparisons to experiment for DFT, ab initio, and multicomponent methods. B3LYP and MPW1K methods with MAD values of 1.5 and 2.1 kcal/mol, respectively, fortuitously outperform the multicomponent CBS-QB3 method, which has a MAD value of 2.3. The MAD value of the O3LYP functional improves to 2.4 kcal/mol from the previously reported 3.0 kcal/mol.

Entities:  

Year:  2005        PMID: 16866406     DOI: 10.1021/jp052504v

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  25 in total

1.  Transition structures of diastereoselective 1,3-dipolar cycloadditions of nitrile oxides to chiral homoallylic alcohols.

Authors:  Jennifer A R Luft; Kieche Meleson; K N Houk
Journal:  Org Lett       Date:  2007-01-25       Impact factor: 6.005

2.  Modeling the scavenging activity of ellagic acid and its methyl derivatives towards hydroxyl, methoxy, and nitrogen dioxide radicals.

Authors:  Manish Kumar Tiwari; Phool Chand Mishra
Journal:  J Mol Model       Date:  2013-11-08       Impact factor: 1.810

Review 3.  Quantum mechanical investigations of organocatalysis: mechanisms, reactivities, and selectivities.

Authors:  Paul Ha-Yeon Cheong; Claude Y Legault; Joann M Um; Nihan Çelebi-Ölçüm; K N Houk
Journal:  Chem Rev       Date:  2011-06-28       Impact factor: 60.622

4.  Benchmarking density functional tight binding models for barrier heights and reaction energetics of organic molecules.

Authors:  Maja Gruden; Ljubica Andjeklović; Akkarapattiakal Kuriappan Jissy; Stepan Stepanović; Matija Zlatar; Qiang Cui; Marcus Elstner
Journal:  J Comput Chem       Date:  2017-07-24       Impact factor: 3.376

5.  Modeling the mechanism of action of lycopene as a hydroxyl radical scavenger.

Authors:  Ajit Kumar Prasad; Phool C Mishra
Journal:  J Mol Model       Date:  2014-04-29       Impact factor: 1.810

6.  Theoretical descriptions of novel triplet germylenes M1-Ge-M2-M3 (M1 = H, Li, Na, K; M2 = Be, Mg, Ca; M3 = H, F, Cl, Br).

Authors:  Mohamad Zaman Kassaee; Samaneh Ashenagar
Journal:  J Mol Model       Date:  2018-02-06       Impact factor: 1.810

7.  Probing substituent effects in aryl-aryl interactions using stereoselective Diels-Alder cycloadditions.

Authors:  Steven E Wheeler; Anne J McNeil; Peter Müller; Timothy M Swager; K N Houk
Journal:  J Am Chem Soc       Date:  2010-03-17       Impact factor: 15.419

8.  Controlling Selectivity for Cycloadditions of Nitrones and Alkenes Tethered by Benzimidazoles: Combining Experiment and Theory.

Authors:  Liping Meng; Selina C Wang; James C Fettinger; Mark J Kurth; Dean J Tantillo
Journal:  European J Org Chem       Date:  2009-04

9.  Accurate reaction enthalpies and sources of error in DFT thermochemistry for aldol, Mannich, and alpha-aminoxylation reactions.

Authors:  Steven E Wheeler; Antonio Moran; Susan N Pieniazek; K N Houk
Journal:  J Phys Chem A       Date:  2009-09-24       Impact factor: 2.781

10.  Ab initio analysis of the Cope rearrangement of germacrane sesquiterpenoids.

Authors:  William N Setzer
Journal:  J Mol Model       Date:  2008-02-15       Impact factor: 1.810

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