Literature DB >> 16817540

Using coalescent simulations to test the impact of quaternary climate cycles on divergence in an alpine plant-insect association.

Eric G DeChaine1, Andrew P Martin.   

Abstract

The Quaternary climate cycles forced species to repeatedly migrate across a continually changing landscape. How these shifts in distribution impacted the evolution of unrelated but ecologically associated taxa has remained elusive due to the stochastic nature of the evolutionary process and variation in species-specific biological characteristics and environmental constraints. To account for the uncertainty in genealogical estimates, we adopted a coalescent approach for testing hypotheses of population divergence in coevolving taxa. We compared genealogies of a specialized herbivorous insect, Parnassius smintheus (Papilionidae), and its host plant, Sedum lanceolatum (Crassulaceae), from the alpine tundra of the Rocky Mountains to null distributions from coalescent simulations to test whether tightly associated taxa shared a common response to the paleoclimatic cycles. Explicit phylogeographic models were generated from geologic and biogeographic data and evaluated over a wide range of divergence times given calibrated mutation rates for both species. Our analyses suggest that the insect and its host plant responded similarly but independently to the climate cycles. By promoting habitat expansion and mixing among alpine populations, glacial periods repeatedly reset the distributions of genetic variation in each species and inhibited continual codivergence among pairs of interacting species.

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Year:  2006        PMID: 16817540

Source DB:  PubMed          Journal:  Evolution        ISSN: 0014-3820            Impact factor:   3.694


  16 in total

1.  Two pulses of diversification across the Isthmus of Tehuantepec in a montane Mexican bird fauna.

Authors:  B R Barber; J Klicka
Journal:  Proc Biol Sci       Date:  2010-04-21       Impact factor: 5.349

2.  Coalescent simulation of intracodon recombination.

Authors:  Miguel Arenas; David Posada
Journal:  Genetics       Date:  2009-11-23       Impact factor: 4.562

3.  Phylogeographic patterns of mtDNA variation revealed multiple glacial refugia for the frog species Feirana taihangnica endemic to the Qinling Mountains.

Authors:  Bin Wang; Jianping Jiang; Feng Xie; Cheng Li
Journal:  J Mol Evol       Date:  2013-02-05       Impact factor: 2.395

4.  Nuclear gene phylogeography using PHASE: dealing with unresolved genotypes, lost alleles, and systematic bias in parameter estimation.

Authors:  Ryan C Garrick; Paul Sunnucks; Rodney J Dyer
Journal:  BMC Evol Biol       Date:  2010-04-30       Impact factor: 3.260

Review 5.  Inference of population history by coupling exploratory and model-driven phylogeographic analyses.

Authors:  Ryan C Garrick; Adalgisa Caccone; Paul Sunnucks
Journal:  Int J Mol Sci       Date:  2010-03-24       Impact factor: 5.923

6.  The role of Pleistocene refugia and rivers in shaping gorilla genetic diversity in central Africa.

Authors:  Nicola M Anthony; Mireille Johnson-Bawe; Kathryn Jeffery; Stephen L Clifford; Kate A Abernethy; Caroline E Tutin; Sally A Lahm; Lee J T White; John F Utley; E Jean Wickings; Michael W Bruford
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-12       Impact factor: 11.205

7.  Simulation of molecular data under diverse evolutionary scenarios.

Authors:  Miguel Arenas
Journal:  PLoS Comput Biol       Date:  2012-05-31       Impact factor: 4.475

Review 8.  Islands in the sky: the impact of Pleistocene climate cycles on biodiversity.

Authors:  Allan J Baker
Journal:  J Biol       Date:  2008-11-03

9.  Miocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota) and Pleistocene population expansions.

Authors:  Steven D Leavitt; Theodore L Esslinger; Pradeep K Divakar; H Thorsten Lumbsch
Journal:  BMC Evol Biol       Date:  2012-09-11       Impact factor: 3.260

10.  Postglacial colonization of the Qinling Mountains: phylogeography of the swelled vent frog (Feirana quadranus).

Authors:  Bin Wang; Jianping Jiang; Feng Xie; Cheng Li
Journal:  PLoS One       Date:  2012-07-25       Impact factor: 3.240

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