Literature DB >> 16803878

Assembly of synthetic locked chromophores with agrobacterium phytochromes Agp1 and Agp2.

Katsuhiko Inomata1, Steffi Noack, Mostafa A S Hammam, Htoi Khawn, Hideki Kinoshita, Yasue Murata, Norbert Michael, Patrick Scheerer, Norbert Krauss, Tilman Lamparter.   

Abstract

Phytochromes are photoreceptors with a bilin chromophore in which light triggers the conversion between the red-absorbing form Pr and the far-red-absorbing form Pfr. Agrobacterium tumefaciens has two phytochromes, Agp1 and Agp2, with antagonistic properties: in darkness, Agp1 converts slowly from Pfr to Pr, whereas Agp2 converts slowly from Pr to Pfr. In a previous study, we have assembled Agp1 with synthetic locked chromophores 15Za, 15Zs, 15Ea, and 15Es in which the C15=C16 double bond is fixed in either the E or Z configuration and the C14-C15 single bond is fixed in either the syn (s) or anti (a) conformation. In the present study, the locked chromophores 5Za and 5Zs were used for assembly with Agp1; in these chromophores, the C4=C5 double bond is fixed in the Z configuration, and the C5-C6 single bond is fixed in either the syn or anti conformation. All locked chromophores were also assembled with Agp2. The data showed that in both phytochromes the Pr chromophore adopts a C4=C5 Z C5-C6 syn C15=C16 Z C14-C15 anti stereochemistry and that in the Pfr chromophore the C15=C16 double bond has isomerized to the E configuration, whereas the C14-C15 single bond remains in the anti conformation. Photoconversion shifted the absorption maxima of the 5Zs adducts to shorter wavelengths, whereas the 5Za adducts were shifted to longer wavelengths. Thus, the C5-C6 single bond of the Pfr chromophore is rather in an anti conformation, supporting the previous suggestion that during photoconversion of phytochromes, a rotation around the ring A-B connecting single bond occurs.

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Year:  2006        PMID: 16803878     DOI: 10.1074/jbc.M603983200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  19 in total

1.  Bathy phytochromes in rhizobial soil bacteria.

Authors:  Gregor Rottwinkel; Inga Oberpichler; Tilman Lamparter
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

2.  Fluorescence of phytochrome adducts with synthetic locked chromophores.

Authors:  Benjamin Zienicke; Li-Yi Chen; Htoi Khawn; Mostafa A S Hammam; Hideki Kinoshita; Johannes Reichert; Anne S Ulrich; Katsuhiko Inomata; Tilman Lamparter
Journal:  J Biol Chem       Date:  2010-11-11       Impact factor: 5.157

Review 3.  From photon to signal in phytochromes: similarities and differences between prokaryotic and plant phytochromes.

Authors:  Soshichiro Nagano
Journal:  J Plant Res       Date:  2016-01-27       Impact factor: 2.629

4.  Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion.

Authors:  Xiaojing Yang; Emina A Stojkovic; Jane Kuk; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-17       Impact factor: 11.205

5.  Mutational analysis of Deinococcus radiodurans bacteriophytochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes.

Authors:  Jeremiah R Wagner; Junrui Zhang; David von Stetten; Mina Günther; Daniel H Murgida; Maria Andrea Mroginski; Joseph M Walker; Katrina T Forest; Peter Hildebrandt; Richard D Vierstra
Journal:  J Biol Chem       Date:  2008-01-10       Impact factor: 5.157

6.  Subpicosecond midinfrared spectroscopy of the Pfr reaction of phytochrome Agp1 from Agrobacterium tumefaciens.

Authors:  Christian Schumann; Ruth Gross; Matthias M N Wolf; Rolf Diller; Norbert Michael; Tilman Lamparter
Journal:  Biophys J       Date:  2008-01-11       Impact factor: 4.033

7.  Unusual spectral properties of bacteriophytochrome Agp2 result from a deprotonation of the chromophore in the red-absorbing form Pr.

Authors:  Benjamin Zienicke; Isabel Molina; René Glenz; Patrick Singer; Dorothee Ehmer; Francisco Velazquez Escobar; Peter Hildebrandt; Rolf Diller; Tilman Lamparter
Journal:  J Biol Chem       Date:  2013-09-13       Impact factor: 5.157

8.  A polarity probe for monitoring light-induced structural changes at the entrance of the chromophore pocket in a bacterial phytochrome.

Authors:  Berthold Borucki; Tilman Lamparter
Journal:  J Biol Chem       Date:  2009-07-29       Impact factor: 5.157

9.  Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: photoconversion and signal transduction.

Authors:  Xiaojing Yang; Jane Kuk; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-17       Impact factor: 11.205

10.  The structure of a complete phytochrome sensory module in the Pr ground state.

Authors:  Lars-Oliver Essen; Jo Mailliet; Jon Hughes
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-17       Impact factor: 11.205

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