Literature DB >> 16803213

Passage times for unbiased polymer translocation through a narrow pore.

Joanne Klein Wolterink1, Gerard T Barkema, Debabrata Panja.   

Abstract

We study the translocation process of a polymer in the absence of external fields for various pore diameters b and membrane thickness L. The polymer performs Rouse and reptation dynamics. The mean translocation time (tau(t)) that the polymer needs to escape from a cell and the mean dwell time (tau(d)) that the polymer spends in the pore during the translocation process obey scaling relations in terms of the polymer length N, L, and b/R(g), where R(g) is the radius of gyration for the polymer. We explain these relations using simple arguments based on polymer dynamics and the equilibrium properties of polymers.

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Year:  2006        PMID: 16803213     DOI: 10.1103/PhysRevLett.96.208301

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  6 in total

1.  Cooperative translocation dynamics of biopolymer chains through nanopores in a membrane: Slow dynamics limit.

Authors:  Hai-Jun Wang; Fang Gu; Xiao-Zhong Hong; Xin-Wu Ba
Journal:  Eur Phys J E Soft Matter       Date:  2010-10-31       Impact factor: 1.890

2.  Passage times for polymer translocation pulled through a narrow pore.

Authors:  Debabrata Panja; Gerard T Barkema
Journal:  Biophys J       Date:  2007-10-19       Impact factor: 4.033

3.  Scaling exponents of forced polymer translocation through a nanopore.

Authors:  A Bhattacharya; W H Morrison; K Luo; T Ala-Nissila; S-C Ying; A Milchev; K Binder
Journal:  Eur Phys J E Soft Matter       Date:  2009-08-08       Impact factor: 1.890

4.  Squishy non-spherical hydrogel microparticles.

Authors:  Ramin Haghgooie; Mehmet Toner; Patrick S Doyle
Journal:  Macromol Rapid Commun       Date:  2009-09-18       Impact factor: 5.734

5.  Polymer translocation in a double-force arrangement.

Authors:  S T T Ollila; K F Luo; T Ala-Nissila; S-C Ying
Journal:  Eur Phys J E Soft Matter       Date:  2009-03-27       Impact factor: 1.890

6.  Polymer translocation through a cylindrical channel.

Authors:  Chiu Tai Andrew Wong; M Muthukumar
Journal:  J Chem Phys       Date:  2008-04-21       Impact factor: 3.488

  6 in total

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