Literature DB >> 16779103

Evaluation of French and English MeSH indexing systems with a parallel corpus.

Aurélie Névéol1, James G Mork, Alan R Aronson, Stéfan J Darmoni.   

Abstract

OBJECTIVE: This paper presents the evaluation of two MeSH indexing systems for French and English on a parallel corpus.
MATERIAL AND METHODS: We describe two automatic MeSH in-dexing systems - MTI for English, and MAIF for French. The French version of the evaluation resources has been manually indexed with MeSH keyword/qualifier pairs. This professional indexing is used as our gold standard in the evaluation of both systems on keyword retrieval.
RESULTS: The English system (MTI) obtains significantly better precision and recall (78% precision and 21% recall at rank 1, vs. 37%. precision and 6% recall for MAIF ). Moreover, the performance of both systems can be optimised by the break-age function used by the French system (MAIF), which selects an adaptive number of descriptors for each resource indexed.
CONCLUSION: MTI achieves better performance. However, both systems have features that can benefit each other.

Mesh:

Year:  2005        PMID: 16779103      PMCID: PMC1560460     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  8 in total

1.  CISMeF: a structured health resource guide.

Authors:  S J Darmoni; J P Leroy; F Baudic; M Douyère; J Piot; B Thirion
Journal:  Methods Inf Med       Date:  2000-03       Impact factor: 2.176

2.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Authors:  A R Aronson
Journal:  Proc AMIA Symp       Date:  2001

3.  Automatic MeSH term assignment and quality assessment.

Authors:  W Kim; A R Aronson; W J Wilbur
Journal:  Proc AMIA Symp       Date:  2001

4.  VUMeF: extending the French involvement in the UMLS Metathesaurus.

Authors:  S J Darmoni; E Jarrousse; P Zweigenbaum; P Le Beux; F Namer; R Baud; M Joubert; H Vallée; R A Côté; A Buemi; D Bourigault; G Recource; S Jeanneau; J M Rodrigues
Journal:  AMIA Annu Symp Proc       Date:  2003

5.  Knowledge-based indexing of the medical literature: the Indexing Aid Project.

Authors:  S M Humphrey; N E Miller
Journal:  J Am Soc Inf Sci       Date:  1987-05

6.  The NLM Indexing Initiative's Medical Text Indexer.

Authors:  Alan R Aronson; James G Mork; Clifford W Gay; Susanne M Humphrey; Willie J Rogers
Journal:  Stud Health Technol Inform       Date:  2004

7.  Beyond synonymy: exploiting the UMLS semantics in mapping vocabularies.

Authors:  O Bodenreider; S J Nelson; W T Hole; H F Chang
Journal:  Proc AMIA Symp       Date:  1998

8.  Indexing consistency in MEDLINE.

Authors:  M E Funk; C A Reid
Journal:  Bull Med Libr Assoc       Date:  1983-04
  8 in total
  4 in total

1.  Besides precision & recall: exploring alternative approaches to evaluating an automatic indexing tool for MEDLINE.

Authors:  Aurélie Neveol; Kelly Zeng; Olivier Bodenreider
Journal:  AMIA Annu Symp Proc       Date:  2006

2.  Contribution to an automated indexing of French-language health web sites.

Authors:  Michel Joubert; Anne-Laure Peretti; Stefan Darmoni; Badisse Dahamna; Marius Fieschi
Journal:  AMIA Annu Symp Proc       Date:  2006

3.  A model for indexing medical documents combining statistical and symbolic knowledge.

Authors:  Paul Avillach; Michel Joubert; Marius Fieschi
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

Review 4.  Clinical Natural Language Processing in languages other than English: opportunities and challenges.

Authors:  Aurélie Névéol; Hercules Dalianis; Sumithra Velupillai; Guergana Savova; Pierre Zweigenbaum
Journal:  J Biomed Semantics       Date:  2018-03-30
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.