Literature DB >> 11825203

Automatic MeSH term assignment and quality assessment.

W Kim1, A R Aronson, W J Wilbur.   

Abstract

For computational purposes documents or other objects are most often represented by a collection of individual attributes that may be strings or numbers. Such attributes are often called features and success in solving a given problem can depend critically on the nature of the features selected to represent documents. Feature selection has received considerable attention in the machine learning literature. In the area of document retrieval we refer to feature selection as indexing. Indexing has not traditionally been evaluated by the same methods used in machine learning feature selection. Here we show how indexing quality may be evaluated in a machine learning setting and apply this methodology to results of the Indexing Initiative at the National Library of Medicine.

Mesh:

Year:  2001        PMID: 11825203      PMCID: PMC2243528     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  8 in total

1.  The NLM Indexing Initiative.

Authors:  A R Aronson; O Bodenreider; H F Chang; S M Humphrey; J G Mork; S J Nelson; T C Rindflesch; W J Wilbur
Journal:  Proc AMIA Symp       Date:  2000

2.  Boosting naïve Bayesian learning on a large subset of MEDLINE.

Authors:  W J Wilbur
Journal:  Proc AMIA Symp       Date:  2000

3.  Developments in automatic text retrieval.

Authors:  G Salton
Journal:  Science       Date:  1991-08-30       Impact factor: 47.728

4.  Beyond synonymy: exploiting the UMLS semantics in mapping vocabularies.

Authors:  O Bodenreider; S J Nelson; W T Hole; H F Chang
Journal:  Proc AMIA Symp       Date:  1998

5.  The effect of textual variation on concept based information retrieval.

Authors:  A R Aronson
Journal:  Proc AMIA Annu Fall Symp       Date:  1996

6.  The representation of meaning in the UMLS.

Authors:  A T McCray; S J Nelson
Journal:  Methods Inf Med       Date:  1995-03       Impact factor: 2.176

7.  Online access to MEDLINE in clinical settings. A study of use and usefulness.

Authors:  R B Haynes; K A McKibbon; C J Walker; N Ryan; D Fitzgerald; M F Ramsden
Journal:  Ann Intern Med       Date:  1990-01-01       Impact factor: 25.391

8.  A performance and failure analysis of SAPHIRE with a MEDLINE test collection.

Authors:  W R Hersh; D H Hickam; R B Haynes; K A McKibbon
Journal:  J Am Med Inform Assoc       Date:  1994 Jan-Feb       Impact factor: 4.497

  8 in total
  22 in total

1.  The dimensions of indexing.

Authors:  W John Wilbur; Won Kim
Journal:  AMIA Annu Symp Proc       Date:  2003

2.  An overview of MetaMap: historical perspective and recent advances.

Authors:  Alan R Aronson; François-Michel Lang
Journal:  J Am Med Inform Assoc       Date:  2010 May-Jun       Impact factor: 4.497

3.  Evaluation of French and English MeSH indexing systems with a parallel corpus.

Authors:  Aurélie Névéol; James G Mork; Alan R Aronson; Stéfan J Darmoni
Journal:  AMIA Annu Symp Proc       Date:  2005

4.  Besides precision & recall: exploring alternative approaches to evaluating an automatic indexing tool for MEDLINE.

Authors:  Aurélie Neveol; Kelly Zeng; Olivier Bodenreider
Journal:  AMIA Annu Symp Proc       Date:  2006

5.  Fine-grained indexing of the biomedical literature: MeSH subheading attachment for a MEDLINE indexing tool.

Authors:  Aurélie Névéol; Sonya E Shooshan; James G Mork; Alan R Aronson
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

6.  Evaluating relevance ranking strategies for MEDLINE retrieval.

Authors:  Zhiyong Lu; Won Kim; W John Wilbur
Journal:  J Am Med Inform Assoc       Date:  2008-10-24       Impact factor: 4.497

7.  Optimal training sets for Bayesian prediction of MeSH assignment.

Authors:  Sunghwan Sohn; Won Kim; Donald C Comeau; W John Wilbur
Journal:  J Am Med Inform Assoc       Date:  2008-04-24       Impact factor: 4.497

8.  Comment on 'MeSH-up: effective MeSH text classification for improved document retrieval'.

Authors:  Aurélie Névéol; James G Mork; Alan R Aronson
Journal:  Bioinformatics       Date:  2009-08-11       Impact factor: 6.937

9.  Stochastic Gradient Descent and the Prediction of MeSH for PubMed Records.

Authors:  W John Wilbur; Won Kim
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

10.  Social tagging in the life sciences: characterizing a new metadata resource for bioinformatics.

Authors:  Benjamin M Good; Joseph T Tennis; Mark D Wilkinson
Journal:  BMC Bioinformatics       Date:  2009-09-25       Impact factor: 3.169

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