Literature DB >> 16777922

beta-Glucosidase as a reporter for the gene expression studies in Thermus thermophilus and constitutive expression of DNA repair genes.

Toshihiro Ohta1, Shin-Ichi Tokishita, Reiko Imazuka, Ichiro Mori, Jin Okamura, Hideo Yamagata.   

Abstract

Thermus thermophilus is an extremely thermophilic eubacterium that grows optimally at 70-75 degrees C. Because the frequency of DNA damage, such as deamination, depurination and single-strand breaks, increases as the temperature rises, the regulation of expression as well as the specificities and activities of T.thermophilus DNA repair systems are of particular interest. To study those systems, we developed a gene expression vector using the T.thermophilus beta-glucosidase gene (bgl) with host strain JOS9 (Deltabgl) derived from the T.thermophilus wild-type strain HB27. Since HB27 has two putative beta-galactosidase genes, the use of a single bgl gene as a reporter in combination with a Deltabgl host strain permits the study of gene expression against a low background level. We assayed Bgl activity with 2-nitrophenyl-beta-d-glucopyranoside as the substrate at 80 degrees C. We measured the expression of seven genes involved in DNA repair--three nucleotide excision repair genes (uvrA, uvrB and uvrC) and four recombinational repair genes (recA, ruvA, ruvB and ruvC). Expression levels of uvrA and uvrB were about three times those of uvrC, while those of ruvA, ruvB and ruvC were almost equal. Both ruvA and ruvC formed an operon with their adjacent 5'-upstream gene paaG and ftsQAZ, respectively. recA was transcribed as an operon of four genes, amt-cinA-ligT-recA. All seven DNA repair genes were expressed constitutively, and the DNA damaging agent mitomycin C did not increase their expression.

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Year:  2006        PMID: 16777922     DOI: 10.1093/mutage/gel025

Source DB:  PubMed          Journal:  Mutagenesis        ISSN: 0267-8357            Impact factor:   3.000


  13 in total

1.  Curing the Megaplasmid pTT27 from Thermus thermophilus HB27 and Maintaining Exogenous Plasmids in the Plasmid-Free Strain.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  Appl Environ Microbiol       Date:  2015-12-28       Impact factor: 4.792

2.  Selection-free markerless genome manipulations in the polyploid bacterium Thermus thermophilus.

Authors:  Haijuan Li
Journal:  3 Biotech       Date:  2019-03-23       Impact factor: 2.406

3.  Cre/lox-based multiple markerless gene disruption in the genome of the extreme thermophile Thermus thermophilus.

Authors:  Yoichiro Togawa; Tatsuo Nunoshiba; Keiichiro Hiratsu
Journal:  Mol Genet Genomics       Date:  2017-08-24       Impact factor: 3.291

4.  Engineering the genome of Thermus thermophilus using a counterselectable marker.

Authors:  Jennifer F Carr; Michael E Danziger; Athena L Huang; Albert E Dahlberg; Steven T Gregory
Journal:  J Bacteriol       Date:  2015-01-20       Impact factor: 3.490

5.  Markerless Gene Deletion with Cytosine Deaminase in Thermus thermophilus Strain HB27.

Authors:  Lei Wang; Jana Hoffmann; Hildegard Watzlawick; Josef Altenbuchner
Journal:  Appl Environ Microbiol       Date:  2015-12-11       Impact factor: 4.792

6.  A reporter gene system for the precise measurement of promoter activity in Thermus thermophilus HB27.

Authors:  Atsushi Fujita; Takaaki Sato; Yoshinori Koyama; Yoshio Misumi
Journal:  Extremophiles       Date:  2015-09-23       Impact factor: 2.395

7.  Transposon mutagenesis of the extremely thermophilic bacterium Thermus thermophilus HB27.

Authors:  Jennifer F Carr; Steven T Gregory; Albert E Dahlberg
Journal:  Extremophiles       Date:  2014-06-20       Impact factor: 2.395

Review 8.  Thermus thermophilus as biological model.

Authors:  Felipe Cava; Aurelio Hidalgo; José Berenguer
Journal:  Extremophiles       Date:  2009-01-21       Impact factor: 2.395

9.  Molecular mechanisms of the whole DNA repair system: a comparison of bacterial and eukaryotic systems.

Authors:  Rihito Morita; Shuhei Nakane; Atsuhiro Shimada; Masao Inoue; Hitoshi Iino; Taisuke Wakamatsu; Kenji Fukui; Noriko Nakagawa; Ryoji Masui; Seiki Kuramitsu
Journal:  J Nucleic Acids       Date:  2010-10-14

10.  Characterization of chromosomal and megaplasmid partitioning loci in Thermus thermophilus HB27.

Authors:  Haijuan Li; Angel Angelov; Vu Thuy Trang Pham; Benedikt Leis; Wolfgang Liebl
Journal:  BMC Genomics       Date:  2015-04-18       Impact factor: 3.969

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