Literature DB >> 16772298

Crystal structures of Clostridium thermocellum xyloglucanase, XGH74A, reveal the structural basis for xyloglucan recognition and degradation.

Carlos Martinez-Fleites1, Catarina I P D Guerreiro, Martin J Baumann, Edward J Taylor, José A M Prates, Luís M A Ferreira, Carlos M G A Fontes, Harry Brumer, Gideon J Davies.   

Abstract

The enzymatic degradation of the plant cell wall is central both to the natural carbon cycle and, increasingly, to environmentally friendly routes to biomass conversion, including the production of biofuels. The plant cell wall is a complex composite of cellulose microfibrils embedded in diverse polysaccharides collectively termed hemicelluloses. Xyloglucan is one such polysaccharide whose hydrolysis is catalyzed by diverse xyloglucanases. Here we present the structure of the Clostridium thermocellum xyloglucanase Xgh74A in both apo and ligand-complexed forms. The structures, in combination with mutagenesis data on the catalytic residues and the kinetics and specificity of xyloglucan hydrolysis reveal a complex subsite specificity accommodating seventeen monosaccharide moieties of the multibranched substrate in an open substrate binding terrain.

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Year:  2006        PMID: 16772298     DOI: 10.1074/jbc.M603583200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  27 in total

1.  Biochemical characterization of a novel thermostable xyloglucanase from an alkalothermophilic Thermomonospora sp.

Authors:  Dipali Pol; Vishnu Menon; Mala Rao
Journal:  Extremophiles       Date:  2011-11-26       Impact factor: 2.395

2.  Identification and characterization of a xyloglucan-specific family 74 glycosyl hydrolase from Streptomyces coelicolor A3(2).

Authors:  Bolormaa Enkhbaatar; Uyangaa Temuujin; Ju-Hyeon Lim; Won-Jae Chi; Yong-Keun Chang; Soon-Kwang Hong
Journal:  Appl Environ Microbiol       Date:  2011-11-18       Impact factor: 4.792

Review 3.  The biochemistry and structural biology of plant cell wall deconstruction.

Authors:  Harry J Gilbert
Journal:  Plant Physiol       Date:  2010-04-20       Impact factor: 8.340

4.  Use of label-free quantitative proteomics to distinguish the secreted cellulolytic systems of Caldicellulosiruptor bescii and Caldicellulosiruptor obsidiansis.

Authors:  Adriane Lochner; Richard J Giannone; Miguel Rodriguez; Manesh B Shah; Jonathan R Mielenz; Martin Keller; Garabed Antranikian; David E Graham; Robert L Hettich
Journal:  Appl Environ Microbiol       Date:  2011-04-15       Impact factor: 4.792

5.  Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.

Authors:  Gregory Arnal; Peter J Stogios; Jathavan Asohan; Mohamed A Attia; Tatiana Skarina; Alexander Holm Viborg; Bernard Henrissat; Alexei Savchenko; Harry Brumer
Journal:  J Biol Chem       Date:  2019-07-19       Impact factor: 5.157

6.  Strategic aromatic residues in the catalytic cleft of the xyloglucanase MtXgh74 modifying thermostability, mode of enzyme action, and viscosity reduction ability.

Authors:  Oksana V Berezina; Sergey V Rykov; Angelina K Polyakova; Marine E Bozdaganyan; Anna V Sidochenko; Melanie Baudrexl; Wolfgang H Schwarz; Vladimir V Zverlov; Sergey V Yarotsky
Journal:  Appl Microbiol Biotechnol       Date:  2021-02-01       Impact factor: 4.813

7.  The N-Terminal GH10 Domain of a Multimodular Protein from Caldicellulosiruptor bescii Is a Versatile Xylanase/β-Glucanase That Can Degrade Crystalline Cellulose.

Authors:  Xianli Xue; Rong Wang; Tao Tu; Pengjun Shi; Rui Ma; Huiying Luo; Bin Yao; Xiaoyun Su
Journal:  Appl Environ Microbiol       Date:  2015-03-27       Impact factor: 4.792

8.  The pepper extracellular xyloglucan-specific endo-β-1,4-glucanase inhibitor protein gene, CaXEGIP1, is required for plant cell death and defense responses.

Authors:  Hyong Woo Choi; Nak Hyun Kim; Yeon Kyeong Lee; Byung Kook Hwang
Journal:  Plant Physiol       Date:  2012-10-23       Impact factor: 8.340

9.  Sequence and structural analysis of the Asp-box motif and Asp-box beta-propellers; a widespread propeller-type characteristic of the Vps10 domain family and several glycoside hydrolase families.

Authors:  Esben M Quistgaard; Søren S Thirup
Journal:  BMC Struct Biol       Date:  2009-07-13

10.  Mechanistic insights into the inhibition of endo-β 1,4 xyloglucan hydrolase by a classical aspartic protease inhibitor.

Authors:  Vishnu Menon; Mala Rao
Journal:  J Fluoresc       Date:  2012-12-05       Impact factor: 2.217

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