Literature DB >> 16766694

Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis.

Susan Wagner1, Anne Bernhardt, Jan Erik Leuendorf, Christel Drewke, Anna Lytovchenko, Nader Mujahed, Cristian Gurgui, Wolf B Frommer, Eckhard Leistner, Alisdair R Fernie, Hanjo Hellmann.   

Abstract

Vitamin B6 represents a highly important group of compounds ubiquitous in all living organisms. It has been demonstrated to alleviate oxidative stress and in its phosphorylated form participates as a cofactor in >100 biochemical reactions. By means of a genetic approach, we have identified a novel mutant, rsr4-1 (for reduced sugar response), with aberrant root and leaf growth that requires supplementation of vitamin B6 for normal development. Cloning of the mutated gene revealed that rsr4-1 carries a point mutation in a member of the PDX1/SOR1/SNZ (for Pyridoxine biosynthesis protein 1/Singlet oxygen resistant 1/Snooze) family that leads to reduced vitamin B6 content. Consequently, metabolism is broadly altered, mainly affecting amino acid, raffinose, and shikimate contents and trichloroacetic acid cycle constituents. Yeast two-hybrid and pull-down analyses showed that Arabidopsis thaliana PDX1 proteins can form oligomers. Interestingly, the mutant form of PDX1 has severely reduced capability to oligomerize, potentially suggesting that oligomerization is important for function. In summary, our results demonstrate the critical function of the PDX1 protein family for metabolism, whole-plant development, and vitamin B6 biosynthesis in higher plants.

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Year:  2006        PMID: 16766694      PMCID: PMC1488916          DOI: 10.1105/tpc.105.036269

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  49 in total

1.  Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth.

Authors:  Fernando Carrari; Danahe Coll-Garcia; Nicolas Schauer; Anna Lytovchenko; Natalia Palacios-Rojas; Ilse Balbo; Mario Rosso; Alisdair R Fernie
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

2.  Improvements in protein secondary structure prediction by an enhanced neural network.

Authors:  D G Kneller; F E Cohen; R Langridge
Journal:  J Mol Biol       Date:  1990-07-05       Impact factor: 5.469

3.  Identification of the pdxK gene that encodes pyridoxine (vitamin B6) kinase in Escherichia coli K-12.

Authors:  Y Yang; G Zhao; M E Winkler
Journal:  FEMS Microbiol Lett       Date:  1996-07-15       Impact factor: 2.742

4.  Analysis of Arabidopsis glucose insensitive mutants, gin5 and gin6, reveals a central role of the plant hormone ABA in the regulation of plant vegetative development by sugar.

Authors:  F Arenas-Huertero; A Arroyo; L Zhou; J Sheen; P León
Journal:  Genes Dev       Date:  2000-08-15       Impact factor: 11.361

5.  The Arabidopsis sugar-insensitive mutants sis4 and sis5 are defective in abscisic acid synthesis and response.

Authors:  R J Laby; M S Kincaid; D Kim; S I Gibson
Journal:  Plant J       Date:  2000-09       Impact factor: 6.417

6.  Antisense suppression of proline degradation improves tolerance to freezing and salinity in Arabidopsis thaliana.

Authors:  T Nanjo; M Kobayashi; Y Yoshiba; Y Kakubari; K Yamaguchi-Shinozaki; K Shinozaki
Journal:  FEBS Lett       Date:  1999-11-19       Impact factor: 4.124

7.  Storekeeper defines a new class of plant-specific DNA-binding proteins and is a putative regulator of patatin expression.

Authors:  Melina Zourelidou; Marta de Torres-Zabala; Caroline Smith; Michael W Bevan
Journal:  Plant J       Date:  2002-05       Impact factor: 6.417

8.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  Growth response to 4-hydroxy-L-threonine of Escherichia coli mutants blocked in vitamin B6 biosynthesis.

Authors:  C Drewke; C Notheis; U Hansen; E Leistner; T Hemscheidt; R E Hill; I D Spenser
Journal:  FEBS Lett       Date:  1993-03-01       Impact factor: 4.124

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  31 in total

1.  root uv-b sensitive mutants are suppressed by specific mutations in ASPARTATE AMINOTRANSFERASE2 and by exogenous vitamin B6.

Authors:  Colin D Leasure; Hong-Yun Tong; Xue-Wen Hou; Amy Shelton; Mike Minton; Raymond Esquerra; Sanja Roje; Hanjo Hellmann; Zheng-Hui He
Journal:  Mol Plant       Date:  2011-04-21       Impact factor: 13.164

2.  Small kernel2 Encodes a Glutaminase in Vitamin B6 Biosynthesis Essential for Maize Seed Development.

Authors:  Yan-Zhuo Yang; Shuo Ding; Yong Wang; Cui-Ling Li; Yun Shen; Robert Meeley; Donald R McCarty; Bao-Cai Tan
Journal:  Plant Physiol       Date:  2017-04-13       Impact factor: 8.340

3.  The pseudoenzyme PDX1.2 boosts vitamin B6 biosynthesis under heat and oxidative stress in Arabidopsis.

Authors:  Cyril Moccand; Svetlana Boycheva; Pedro Surriabre; Marina Tambasco-Studart; Maja Raschke; Markus Kaufmann; Teresa B Fitzpatrick
Journal:  J Biol Chem       Date:  2014-02-06       Impact factor: 5.157

4.  The folylpolyglutamate synthetase plastidial isoform is required for postembryonic root development in Arabidopsis.

Authors:  Avinash C Srivastava; Perla A Ramos-Parra; Mohamed Bedair; Ana L Robledo-Hernández; Yuhong Tang; Lloyd W Sumner; Rocío I Díaz de la Garza; Elison B Blancaflor
Journal:  Plant Physiol       Date:  2011-01-13       Impact factor: 8.340

5.  Vitamer levels, stress response, enzyme activity, and gene regulation of Arabidopsis lines mutant in the pyridoxine/pyridoxamine 5'-phosphate oxidase (PDX3) and the pyridoxal kinase (SOS4) genes involved in the vitamin B6 salvage pathway.

Authors:  Eugenia González; David Danehower; Margaret E Daub
Journal:  Plant Physiol       Date:  2007-09-14       Impact factor: 8.340

6.  Systemic signaling of the plant nitrogen status triggers specific transcriptome responses depending on the nitrogen source in Medicago truncatula.

Authors:  Sandrine Ruffel; Sandra Freixes; Sandrine Balzergue; Pascal Tillard; Christian Jeudy; Marie Laure Martin-Magniette; Margaretha J van der Merwe; Klementina Kakar; Jerôme Gouzy; Alisdair R Fernie; Michael Udvardi; Christophe Salon; Alain Gojon; Marc Lepetit
Journal:  Plant Physiol       Date:  2008-02-20       Impact factor: 8.340

7.  Elongation changes of exploratory and root hair systems induced by aminocyclopropane carboxylic acid and aminoethoxyvinylglycine affect nitrate uptake and BnNrt2.1 and BnNrt1.1 transporter gene expression in oilseed rape.

Authors:  Antonin Leblanc; Hugues Renault; Julien Lecourt; Philippe Etienne; Carole Deleu; Erwan Le Deunff
Journal:  Plant Physiol       Date:  2008-02-20       Impact factor: 8.340

8.  Arabidopsis thaliana PDX1.2 is critical for embryo development and heat shock tolerance.

Authors:  Jan Erik Leuendorf; Sutton L Mooney; Liyuan Chen; Hanjo A Hellmann
Journal:  Planta       Date:  2014-04-19       Impact factor: 4.116

9.  NAD-dependent isocitrate dehydrogenase mutants of Arabidopsis suggest the enzyme is not limiting for nitrogen assimilation.

Authors:  Thomas Lemaitre; Ewa Urbanczyk-Wochniak; Valerie Flesch; Evelyne Bismuth; Alisdair R Fernie; Michael Hodges
Journal:  Plant Physiol       Date:  2007-04-27       Impact factor: 8.340

10.  Vitamin B6 deficient plants display increased sensitivity to high light and photo-oxidative stress.

Authors:  Michel Havaux; Brigitte Ksas; Agnieszka Szewczyk; Dominique Rumeau; Fabrice Franck; Stefano Caffarri; Christian Triantaphylidès
Journal:  BMC Plant Biol       Date:  2009-11-10       Impact factor: 4.215

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