Literature DB >> 16756271

Formylation domain: an essential modifying enzyme for the nonribosomal biosynthesis of linear gramicidin.

Georg Schoenafinger1, Nadine Schracke, Uwe Linne, Mohamed A Marahiel.   

Abstract

Formylation is an important part of ribosomal peptide synthesis of prokaryotes. In nonribosomal peptide synthesis, however, N-formylation is rather unusual and therefore so far unexplored. In this work, the first module of the linear gramicidin nonribosomal peptide synthetase, LgrA1, consisting of a hypothetical formylation domain, an adenylation, and a peptidyl carrier protein domain was tested for formyltransferase activity in vitro. We demonstrate here that the putative formylation domain does indeed transfer the formyl group of formyltetrahydrofolate (fH4F) onto the first amino acid valine using both cofactors N10- and N5-fH4F, respectively. Most important, the necessity of the formylated starter unit formyl-valine for the initiation of the gramicidin biosynthesis was tested by elongation assays with the bimodular system from LgrA. By omitting the formyl group donor, no condensation product of valine with the subsequent building block glycine was detected, whereas the dipeptide formyl-valyl-glycine was found when assayed in the presence of either formyl donor. The proven formylation activity of the first domain of LgrA represents a novel tailoring enzyme in nonribosomal peptide synthesis.

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Year:  2006        PMID: 16756271     DOI: 10.1021/ja0611240

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  Synthetic cycle of the initiation module of a formylating nonribosomal peptide synthetase.

Authors:  Janice M Reimer; Martin N Aloise; Paul M Harrison; T Martin Schmeing
Journal:  Nature       Date:  2016-01-14       Impact factor: 49.962

2.  Bacteria of the Roseobacter clade show potential for secondary metabolite production.

Authors:  Torben Martens; Lone Gram; Hans-Peter Grossart; Daniel Kessler; Rolf Müller; Meinhard Simon; Silke C Wenzel; Thorsten Brinkhoff
Journal:  Microb Ecol       Date:  2007-03-10       Impact factor: 4.552

Review 3.  Structural insights into nonribosomal peptide enzymatic assembly lines.

Authors:  Alexander Koglin; Christopher T Walsh
Journal:  Nat Prod Rep       Date:  2009-05-22       Impact factor: 13.423

Review 4.  Refining and expanding nonribosomal peptide synthetase function and mechanism.

Authors:  Matt McErlean; Jonathan Overbay; Steven Van Lanen
Journal:  J Ind Microbiol Biotechnol       Date:  2019-01-23       Impact factor: 3.346

Review 5.  Explorations of catalytic domains in non-ribosomal peptide synthetase enzymology.

Authors:  Gene H Hur; Christopher R Vickery; Michael D Burkart
Journal:  Nat Prod Rep       Date:  2012-07-17       Impact factor: 13.423

Review 6.  Biosynthesis of depsipeptides, or Depsi: The peptides with varied generations.

Authors:  Diego A Alonzo; T Martin Schmeing
Journal:  Protein Sci       Date:  2020-11-02       Impact factor: 6.725

7.  Refactoring the Cryptic Streptophenazine Biosynthetic Gene Cluster Unites Phenazine, Polyketide, and Nonribosomal Peptide Biochemistry.

Authors:  Katherine D Bauman; Jie Li; Kazuya Murata; Simone M Mantovani; Samira Dahesh; Victor Nizet; Hanna Luhavaya; Bradley S Moore
Journal:  Cell Chem Biol       Date:  2019-03-07       Impact factor: 8.116

8.  Oxazolomycin biosynthesis in Streptomyces albus JA3453 featuring an "acyltransferase-less" type I polyketide synthase that incorporates two distinct extender units.

Authors:  Chunhua Zhao; Jane M Coughlin; Jianhua Ju; Dongqing Zhu; Evelyn Wendt-Pienkowski; Xiufen Zhou; Zhijun Wang; Ben Shen; Zixin Deng
Journal:  J Biol Chem       Date:  2010-04-20       Impact factor: 5.157

Review 9.  Ribosomal peptide natural products: bridging the ribosomal and nonribosomal worlds.

Authors:  John A McIntosh; Mohamed S Donia; Eric W Schmidt
Journal:  Nat Prod Rep       Date:  2009-04       Impact factor: 13.423

10.  Biosynthesis Gene Cluster and Oxazole Ring Formation Enzyme for Inthomycins in Streptomyces sp. Strain SYP-A7193.

Authors:  Shao-Yang Hou; Meng-Yue Zhang; Hong-Da Wang; Yi-Xuan Zhang
Journal:  Appl Environ Microbiol       Date:  2020-10-01       Impact factor: 4.792

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