Literature DB >> 1673286

Fixed-bin analysis for statistical evaluation of continuous distributions of allelic data from VNTR loci, for use in forensic comparisons.

B Budowle1, A M Giusti, J S Waye, F S Baechtel, R M Fourney, D E Adams, L A Presley, H A Deadman, K L Monson.   

Abstract

The detection of DNA polymorphisms by RFLP analysis is having a major impact on identity testing in forensic science. At present, this approach is the best effort a forensic scientist can make to exclude an individual who has been falsely associated with an evidentiary sample found at a crime scene. When an analysis fails to exclude a suspect as a potential contributor of an evidentiary sample, a means should be provided to assess suitable weight to the putative match. Most important, the statistical analysis should not place undue weight on a genetic profile derived from an unknown sample that is attributed to an accused individual. The method must allow for limitations in conventional agarose-submarine-gel electrophoresis and Southern blotting procedure, limited sample population data, possible subpopulation differences, and potential sampling error. A conservative statistical method was developed based on arbitrarily defined fixed bins. This approach permits classification of continuous allelic data, provides for a simple and portable data-base system, and is unlikely to underestimate the frequency of occurrence of a set of alleles. This will help ensure that undue weight is not placed on a sample attributed to an accused individual.

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Year:  1991        PMID: 1673286      PMCID: PMC1683046     

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  22 in total

1.  Analysis of the VNTR locus D1S80 by the PCR followed by high-resolution PAGE.

Authors:  B Budowle; R Chakraborty; A M Giusti; A J Eisenberg; R C Allen
Journal:  Am J Hum Genet       Date:  1991-01       Impact factor: 11.025

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Modifications to improve the effectiveness of restriction fragment length polymorphism typing.

Authors:  B Budowle; F S Baechtel
Journal:  Appl Theor Electrophor       Date:  1990

4.  Application of deoxyribonucleic acid (DNA) polymorphisms to the analysis of DNA recovered from sperm.

Authors:  A Giusti; M Baird; S Pasquale; I Balazs; J Glassberg
Journal:  J Forensic Sci       Date:  1986-04       Impact factor: 1.832

5.  Variable number of tandem repeat (VNTR) markers for human gene mapping.

Authors:  Y Nakamura; M Leppert; P O'Connell; R Wolff; T Holm; M Culver; C Martin; E Fujimoto; M Hoff; E Kumlin
Journal:  Science       Date:  1987-03-27       Impact factor: 47.728

6.  Polymerase chain reaction amplification products separated on rehydratable polyacrylamide gels and stained with silver.

Authors:  R C Allen; G Graves; B Budowle
Journal:  Biotechniques       Date:  1989 Jul-Aug       Impact factor: 1.993

7.  An equation for DNA electrophoretic mobility in agarose gels.

Authors:  C E Willis; D G Willis; G P Holmquist
Journal:  Appl Theor Electrophor       Date:  1988

8.  Allele-specific DNA identity patterns.

Authors:  J S Wainscoat; S Pilkington; T E Peto; J I Bell; D R Higgs
Journal:  Hum Genet       Date:  1987-04       Impact factor: 4.132

9.  Measurement of DNA length by gel electrophoresis II: Comparison of methods for relating mobility to fragment length.

Authors:  J K Elder; E M Southern
Journal:  Anal Biochem       Date:  1983-01       Impact factor: 3.365

10.  A highly polymorphic locus in human DNA.

Authors:  A R Wyman; R White
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

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  62 in total

1.  Genetic variation at minisatellite loci D1S7, D4S139, D5S110 and D17S79 among three population groups of eastern India.

Authors:  R Dutta; V K Kashyap
Journal:  J Genet       Date:  2001-04       Impact factor: 1.166

2.  Independence of VNTR alleles defined as fixed bins.

Authors:  B S Weir
Journal:  Genetics       Date:  1992-04       Impact factor: 4.562

3.  Genetic differences at four DNA typing loci in Finnish, Italian, and mixed Caucasian populations.

Authors:  D E Krane; R W Allen; S A Sawyer; D A Petrov; D L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

4.  Distribution of apolipoprotein(a) in the plasma from patients with lipoprotein lipase deficiency and with type III hyperlipoproteinemia. No evidence for a triglyceride-rich precursor of lipoprotein(a).

Authors:  C Sandholzer; G Feussner; J Brunzell; G Utermann
Journal:  J Clin Invest       Date:  1992-11       Impact factor: 14.808

Review 5.  Population genetics in the forensic DNA debate.

Authors:  B S Weir
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

6.  Testing Hardy-Weinberg equilibrium on allelic data from VNTR loci.

Authors:  S Geisser; W Johnson
Journal:  Am J Hum Genet       Date:  1992-11       Impact factor: 11.025

7.  Independence of VNTR alleles defined as floating bins.

Authors:  B S Weir
Journal:  Am J Hum Genet       Date:  1992-11       Impact factor: 11.025

8.  Allelic structure and distribution of 103 STR loci in a Southern Tunisian population.

Authors:  Abdellatif Maalej; Ahmed Rebai; Adnen Ayadi; Jomaa Jouida; Hafedh Makni; Hammadi Ayadi
Journal:  J Genet       Date:  2004-04       Impact factor: 1.166

9.  A note on Hardy-Weinberg equilibrium of VNTR data by using the Federal Bureau of Investigation's fixed-bin method.

Authors:  B Devlin; N Risch
Journal:  Am J Hum Genet       Date:  1992-09       Impact factor: 11.025

10.  Ethnic differentiation at VNTR loci, with special reference to forensic applications.

Authors:  B Devlin; N Risch
Journal:  Am J Hum Genet       Date:  1992-09       Impact factor: 11.025

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