Literature DB >> 16714348

Structure of tightly membrane-bound mastoparan-X, a G-protein-activating peptide, determined by solid-state NMR.

Yasuto Todokoro1, Ikuko Yumen, Kei Fukushima, Shin-Won Kang, Jang-Su Park, Toshiyuki Kohno, Kaori Wakamatsu, Hideo Akutsu, Toshimichi Fujiwara.   

Abstract

The structure of mastoparan-X (MP-X), a G-protein activating peptide from wasp venom, in the state tightly bound to anionic phospholipid bilayers was determined by solid-state NMR spectroscopy. Carbon-13 and nitrogen-15 NMR signals of uniformly labeled MP-X were completely assigned by multidimensional intraresidue C-C, N-CalphaCbeta, and N-Calpha-C', and interresidue Calpha-CalphaCbeta, N-CalphaCbeta, and N-C'-Calpha correlation experiments. The backbone torsion angles were predicted from the chemical shifts of 13C', 13Calpha, 13Cbeta, and 15N signals with the aid of protein NMR database programs. In addition, two 13C-13C and three 13C-15N distances between backbone nuclei were precisely measured by rotational resonance and REDOR experiments, respectively. The backbone structure of MP-X was determined from the 26 dihedral angle restraints and five distances with an average root-mean-square deviation of 0.6 A. Peptide MP-X in the bilayer-bound state formed an amphiphilic alpha-helix for residues Trp3-Leu14 and adopted an extended conformation for Asn2. This membrane-bound conformation is discussed in relation to the peptide's activities to form pores in membranes and to activate G-proteins. This study demonstrates the power of multidimensional solid-state NMR of uniformly isotope-labeled molecules and distance measurements for determining the structures of peptides bound to lipid membranes.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16714348      PMCID: PMC1518647          DOI: 10.1529/biophysj.106.082735

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  42 in total

1.  Solid-state NMR studies of the structure and mechanisms of proteins.

Authors:  Lynmarie K Thompson
Journal:  Curr Opin Struct Biol       Date:  2002-10       Impact factor: 6.809

2.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

3.  Protein structure determination by high-resolution solid-state NMR spectroscopy: application to microcrystalline ubiquitin.

Authors:  Stephan G Zech; A Joshua Wand; Ann E McDermott
Journal:  J Am Chem Soc       Date:  2005-06-22       Impact factor: 15.419

4.  Membrane-bound conformation of mastoparan-X, a G-protein-activating peptide.

Authors:  K Wakamatsu; A Okada; T Miyazawa; M Ohya; T Higashijima
Journal:  Biochemistry       Date:  1992-06-23       Impact factor: 3.162

5.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

6.  Residual backbone and side-chain 13C and 15N resonance assignments of the intrinsic transmembrane light-harvesting 2 protein complex by solid-state Magic Angle Spinning NMR spectroscopy.

Authors:  A J van Gammeren; F B Hulsbergen; J G Hollander; H J M de Groot
Journal:  J Biomol NMR       Date:  2005-04       Impact factor: 2.835

7.  Solution NMR spectroscopy of the human vasopressin V2 receptor, a G protein-coupled receptor.

Authors:  Changlin Tian; Richard M Breyer; Hak Jun Kim; Murthy D Karra; David B Friedman; Anne Karpay; Charles R Sanders
Journal:  J Am Chem Soc       Date:  2005-06-08       Impact factor: 15.419

8.  Relationship between the tertiary structures of mastoparan B and its analogs and their lytic activities studied by NMR spectroscopy.

Authors:  K Yu; S Kang; N Park; J Shin; Y Kim
Journal:  J Pept Res       Date:  2000-01

9.  A new general method for the biosynthesis of stable isotope-enriched peptides using a decahistidine-tagged ubiquitin fusion system: an application to the production of mastoparan-X uniformly enriched with 15N and 15N/13C.

Authors:  T Kohno; H Kusunoki; K Sato; K Wakamatsu
Journal:  J Biomol NMR       Date:  1998-07       Impact factor: 2.835

10.  Chemical shift referencing in MAS solid state NMR.

Authors:  Corey R Morcombe; Kurt W Zilm
Journal:  J Magn Reson       Date:  2003-06       Impact factor: 2.229

View more
  22 in total

1.  Simultaneous acquisition of PAR and PAIN spectra.

Authors:  Anders B Nielsen; Kathrin Székely; Julia Gath; Matthias Ernst; Niels Chr Nielsen; Beat H Meier
Journal:  J Biomol NMR       Date:  2012-02-28       Impact factor: 2.835

2.  Structure, topology, and tilt of cell-signaling peptides containing nuclear localization sequences in membrane bilayers determined by solid-state NMR and molecular dynamics simulation studies.

Authors:  Ayyalusamy Ramamoorthy; Senthil K Kandasamy; Dong-Kuk Lee; Srikanth Kidambi; Ronald G Larson
Journal:  Biochemistry       Date:  2007-01-30       Impact factor: 3.162

Review 3.  Solid-state 2H NMR spectroscopy of retinal proteins in aligned membranes.

Authors:  Michael F Brown; Maarten P Heyn; Constantin Job; Suhkmann Kim; Stephan Moltke; Koji Nakanishi; Alexander A Nevzorov; Andrey V Struts; Gilmar F J Salgado; Ingrid Wallat
Journal:  Biochim Biophys Acta       Date:  2007-10-23

4.  Spectral fitting for signal assignment and structural analysis of uniformly 13C-labeled solid proteins by simulated annealing based on chemical shifts and spin dynamics.

Authors:  Yoh Matsuki; Hideo Akutsu; Toshimichi Fujiwara
Journal:  J Biomol NMR       Date:  2007-07-06       Impact factor: 2.835

5.  Solid-state NMR spectroscopy of human immunodeficiency virus fusion peptides associated with host-cell-like membranes: 2D correlation spectra and distance measurements support a fully extended conformation and models for specific antiparallel strand registries.

Authors:  Wei Qiang; Michele L Bodner; David P Weliky
Journal:  J Am Chem Soc       Date:  2008-03-28       Impact factor: 15.419

Review 6.  Membrane-active peptides: binding, translocation, and flux in lipid vesicles.

Authors:  Paulo F Almeida
Journal:  Biochim Biophys Acta       Date:  2014-04-25

7.  Secondary structural analysis of proteins based on (13)C chemical shift assignments in unresolved solid-state NMR spectra enhanced by fragmented structure database.

Authors:  Keisuke Ikeda; Ayako Egawa; Toshimichi Fujiwara
Journal:  J Biomol NMR       Date:  2012-12-29       Impact factor: 2.835

8.  Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations.

Authors:  Markus Weingarth; Christian Ader; Adrien S J Melquiond; Deepak Nand; Olaf Pongs; Stefan Becker; Alexandre M J J Bonvin; Marc Baldus
Journal:  Biophys J       Date:  2012-07-03       Impact factor: 4.033

9.  Structure analysis of membrane-reconstituted subunit c-ring of E. coli H+-ATP synthase by solid-state NMR.

Authors:  Yasuto Todokoro; Masatoshi Kobayashi; Takeshi Sato; Toru Kawakami; Ikuko Yumen; Saburo Aimoto; Toshimichi Fujiwara; Hideo Akutsu
Journal:  J Biomol NMR       Date:  2010-07-02       Impact factor: 2.835

10.  Small changes in the primary structure of transportan 10 alter the thermodynamics and kinetics of its interaction with phospholipid vesicles.

Authors:  Lindsay E Yandek; Antje Pokorny; Paulo F F Almeida
Journal:  Biochemistry       Date:  2008-02-09       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.