Literature DB >> 16683758

Characterizing the protein folding transition state using psi analysis.

Tobin R Sosnick1, Bryan A Krantz, Robin S Dothager, Michael Baxa.   

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Year:  2006        PMID： 16683758     DOI： 10.1021/cr040431q

Source DB:  PubMed          Journal:  Chem Rev        ISSN： 0009-2665            Impact factor:   60.622


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  37 in total

1.  The amino-terminal helix modulates light-activated conformational changes in AsLOV2.

Authors:  Josiah P Zayner; Chloe Antoniou; Tobin R Sosnick
Journal:  J Mol Biol       Date:  2012-03-07       Impact factor: 5.469

2.  Modeling large regions in proteins: applications to loops, termini, and folding.

Authors:  Aashish N Adhikari; Jian Peng; Michael Wilde; Jinbo Xu; Karl F Freed; Tobin R Sosnick
Journal:  Protein Sci       Date:  2011-12-05       Impact factor: 6.725

3.  A "Link-Psi" strategy using crosslinking indicates that the folding transition state of ubiquitin is not very malleable.

Authors:  Ali T Shandiz; Michael C Baxa; Tobin R Sosnick
Journal:  Protein Sci       Date:  2012-04-23       Impact factor: 6.725

4.  Visualizing transient protein-folding intermediates by tryptophan-scanning mutagenesis.

Authors:  Alexis Vallée-Bélisle; Stephen W Michnick
Journal:  Nat Struct Mol Biol       Date:  2012-06-10       Impact factor: 15.369

5.  Discrete molecular dynamics: an efficient and versatile simulation method for fine protein characterization.

Authors:  David Shirvanyants; Feng Ding; Douglas Tsao; Srinivas Ramachandran; Nikolay V Dokholyan
Journal:  J Phys Chem B       Date:  2012-02-10       Impact factor: 2.991

6.  Refolding upon force quench and pathways of mechanical and thermal unfolding of ubiquitin.

Authors:  Mai Suan Li; Maksim Kouza; Chin-Kun Hu
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

7.  Intramolecular cross-linking evaluated as a structural probe of the protein folding transition state.

Authors:  Ali T Shandiz; Benjamin R Capraro; Tobin R Sosnick
Journal:  Biochemistry       Date:  2007-11-07       Impact factor: 3.162

8.  Phi-value analysis of a three-state protein folding pathway by NMR relaxation dispersion spectroscopy.

Authors:  Philipp Neudecker; Arash Zarrine-Afsar; Alan R Davidson; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-26       Impact factor: 11.205

9.  An error analysis for two-state protein-folding kinetic parameters and phi-values: progress toward precision by exploring pH dependencies on Leffler plots.

Authors:  Eva S Cobos; Adela M Candel; Jose C Martinez
Journal:  Biophys J       Date:  2008-01-25       Impact factor: 4.033

10.  Identifying critical residues in protein folding: Insights from phi-value and P(fold) analysis.

Authors:  P F N Faísca; R D M Travasso; R C Ball; E I Shakhnovich
Journal:  J Chem Phys       Date:  2008-09-07       Impact factor: 3.488
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