Literature DB >> 16670681

Copy-number control of the Escherichia coli chromosome: a plasmidologist's view.

Kurt Nordström1, Santanu Dasgupta.   

Abstract

The homeostatic system that sets the copy number, and corrects over-replication and under-replication, seems to be different for chromosomes and plasmids in bacteria. Whereas plasmid replication is random in time, chromosome replication is tightly coordinated with the cell cycle such that all origins are initiated synchronously at the same cell mass per origin once per cell cycle. In this review, we propose that despite their apparent differences, the copy-number control of the Escherichia coli chromosome is similar to that of plasmids. The basic mechanism that is shared by both systems is negative-feedback control of the availability of a protein or RNA positive initiator. Superimposed on this basic mechanism are at least three systems that secure the synchronous initiation of multiple origins; however, these mechanisms are not essential for maintaining the copy number.

Entities:  

Mesh:

Year:  2006        PMID: 16670681      PMCID: PMC1479556          DOI: 10.1038/sj.embor.7400681

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  43 in total

Review 1.  The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication.

Authors:  Walter Messer
Journal:  FEMS Microbiol Rev       Date:  2002-11       Impact factor: 16.408

2.  Eclipse period without sequestration in Escherichia coli.

Authors:  Jan Olsson; Santanu Dasgupta; Otto G Berg; Kurt Nordström
Journal:  Mol Microbiol       Date:  2002-06       Impact factor: 3.501

Review 3.  Coupling the initiation of chromosome replication to cell size in Escherichia coli.

Authors:  William D Donachie; Garry W Blakely
Journal:  Curr Opin Microbiol       Date:  2003-04       Impact factor: 7.934

4.  Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein.

Authors:  Johanna Eltz Camara; Kirsten Skarstad; Elliott Crooke
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

5.  Titration of the Escherichia coli DnaA protein to excess datA sites causes destabilization of replication forks, delayed replication initiation and delayed cell division.

Authors:  Anders Løbner-Olesen; Kirsten Skarstad
Journal:  Mol Microbiol       Date:  2003-10       Impact factor: 3.501

Review 6.  The initiation mess?

Authors:  J Herrick; M Kohiyama; T Atlung; F G Hansen
Journal:  Mol Microbiol       Date:  1996-02       Impact factor: 3.501

7.  P1 and NR1 plasmid replication during the cell cycle of Escherichia coli.

Authors:  J A Bogan; J E Grimwade; M Thornton; P Zhou; G D Denning; C E Helmstetter
Journal:  Plasmid       Date:  2001-05       Impact factor: 3.466

8.  Relationship between cell size and time of initiation of DNA replication.

Authors:  W D Donachie
Journal:  Nature       Date:  1968-09-07       Impact factor: 49.962

9.  Chromosome replication and the division cycle of Escherichia coli B/r.

Authors:  S Cooper; C E Helmstetter
Journal:  J Mol Biol       Date:  1968-02-14       Impact factor: 5.469

10.  Eclipse-synchrony relationship in Escherichia coli strains with mutations affecting sequestration, initiation of replication and superhelicity of the bacterial chromosome.

Authors:  Jan A Olsson; Kurt Nordström; Karin Hjort; Santanu Dasgupta
Journal:  J Mol Biol       Date:  2003-12-12       Impact factor: 5.469

View more
  15 in total

1.  Hacking DNA copy number for circuit engineering.

Authors:  Feilun Wu; Lingchong You
Journal:  Nat Genet       Date:  2017-07-27       Impact factor: 38.330

Review 2.  The biology of habitat dominance; can microbes behave as weeds?

Authors:  Jonathan A Cray; Andrew N W Bell; Prashanth Bhaganna; Allen Y Mswaka; David J Timson; John E Hallsworth
Journal:  Microb Biotechnol       Date:  2013-01-22       Impact factor: 5.813

3.  Measurement of gene regulation in individual cells reveals rapid switching between promoter states.

Authors:  Leonardo A Sepúlveda; Heng Xu; Jing Zhang; Mengyu Wang; Ido Golding
Journal:  Science       Date:  2016-03-10       Impact factor: 47.728

4.  Enhancing yields of low and single copy number plasmid DNAs from Escherichia coli cells.

Authors:  Whitney N Wood; Kyle D Smith; Jennifer A Ream; L Kevin Lewis
Journal:  J Microbiol Methods       Date:  2016-12-23       Impact factor: 2.363

5.  Recombineering and MAGE.

Authors:  Timothy M Wannier; Peter N Ciaccia; Andrew D Ellington; Gabriel T Filsinger; Farren J Isaacs; Kamyab Javanmardi; Michaela A Jones; Aditya M Kunjapur; Akos Nyerges; Csaba Pal; Max G Schubert; George M Church
Journal:  Nat Rev Methods Primers       Date:  2021-01-14

Review 6.  Evolution of the clock from yeast to man by period-doubling folds in the cellular oscillator.

Authors:  R R Klevecz; C M Li
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2007

7.  A process for microbial hydrocarbon synthesis: Overproduction of fatty acids in Escherichia coli and catalytic conversion to alkanes.

Authors:  Rebecca M Lennen; Drew J Braden; Ryan A West; James A Dumesic; Brian F Pfleger
Journal:  Biotechnol Bioeng       Date:  2010-06-01       Impact factor: 4.530

Review 8.  The bacterial cell cycle, chromosome inheritance and cell growth.

Authors:  Rodrigo Reyes-Lamothe; David J Sherratt
Journal:  Nat Rev Microbiol       Date:  2019-08       Impact factor: 60.633

Review 9.  Bacterial growth: a statistical physicist's guide.

Authors:  Rosalind J Allen; Bartlomiej Waclaw
Journal:  Rep Prog Phys       Date:  2018-10-01

10.  A checkpoint control orchestrates the replication of the two chromosomes of Vibrio cholerae.

Authors:  Marie-Eve Val; Martial Marbouty; Francisco de Lemos Martins; Sean P Kennedy; Harry Kemble; Michael J Bland; Christophe Possoz; Romain Koszul; Ole Skovgaard; Didier Mazel
Journal:  Sci Adv       Date:  2016-04-22       Impact factor: 14.136

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.