Literature DB >> 30270850

Bacterial growth: a statistical physicist's guide.

Rosalind J Allen1, Bartlomiej Waclaw.   

Abstract

Bacterial growth presents many beautiful phenomena that pose new theoretical challenges to statistical physicists, and are also amenable to laboratory experimentation. This review provides some of the essential biological background, discusses recent applications of statistical physics in this field, and highlights the potential for future research.

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Mesh：

Year:  2018        PMID： 30270850      PMCID： PMC6330087          DOI： 10.1088/1361-6633/aae546

Source DB:  PubMed          Journal:  Rep Prog Phys        ISSN： 0034-4885


  141 in total

1.  Robust growth of Escherichia coli.

Authors:  Ping Wang; Lydia Robert; James Pelletier; Wei Lien Dang; Francois Taddei; Andrew Wright; Suckjoon Jun
Journal:  Curr Biol       Date:  2010-05-27       Impact factor: 10.834

Review 2.  On multiple-nutrient-limited growth of microorganisms, with special reference to dual limitation by carbon and nitrogen substrates.

Authors:  T Egli
Journal:  Antonie Van Leeuwenhoek       Date:  1991 Oct-Nov       Impact factor: 2.271

Review 3.  Social evolution theory for microorganisms.

Authors:  Stuart A West; Ashleigh S Griffin; Andy Gardner; Stephen P Diggle
Journal:  Nat Rev Microbiol       Date:  2006-08       Impact factor: 60.633

4.  STUDIES ON UNBALANCED GROWTH IN ESCHERICHIA COLI.

Authors:  S S Cohen; H D Barner
Journal:  Proc Natl Acad Sci U S A       Date:  1954-10       Impact factor: 11.205

5.  Reaction coordinates for the flipping of genetic switches.

Authors:  Marco J Morelli; Sorin Tanase-Nicola; Rosalind J Allen; Pieter Rein ten Wolde
Journal:  Biophys J       Date:  2008-01-25       Impact factor: 4.033

6.  Speed of invasion of an expanding population by a horizontally transmitted trait.

Authors:  Juan Venegas-Ortiz; Rosalind J Allen; Martin R Evans
Journal:  Genetics       Date:  2013-12-02       Impact factor: 4.562

7.  The Synchronization of Replication and Division Cycles in Individual E. coli Cells.

Authors:  Mats Wallden; David Fange; Ebba Gregorsson Lundius; Özden Baltekin; Johan Elf
Journal:  Cell       Date:  2016-07-28       Impact factor: 41.582

Review 8.  Microbial biofilms.

Authors:  J W Costerton; Z Lewandowski; D E Caldwell; D R Korber; H M Lappin-Scott
Journal:  Annu Rev Microbiol       Date:  1995       Impact factor: 15.500

9.  Penicillin binding protein 5 affects cell diameter, contour, and morphology of Escherichia coli.

Authors:  D E Nelson; K D Young
Journal:  J Bacteriol       Date:  2000-03       Impact factor: 3.490

10.  Bacterial colony from two-dimensional division to three-dimensional development.

Authors:  Pin-Tzu Su; Chih-Tang Liao; Jiunn-Ren Roan; Shao-Hung Wang; Arthur Chiou; Wan-Jr Syu
Journal:  PLoS One       Date:  2012-11-14       Impact factor: 3.240
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  14 in total

1.  Power-law tail in lag time distribution underlies bacterial persistence.

Authors:  Emrah Şimşek; Minsu Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-19       Impact factor: 11.205

2.  Pseudomonas Strains Induce Transcriptional and Morphological Changes and Reduce Root Colonization of Verticillium spp.

Authors:  Rebekka Harting; Alexandra Nagel; Kai Nesemann; Annalena M Höfer; Emmanouil Bastakis; Harald Kusch; Claire E Stanley; Martina Stöckli; Alexander Kaever; Katharina J Hoff; Mario Stanke; Andrew J deMello; Markus Künzler; Cara H Haney; Susanna A Braus-Stromeyer; Gerhard H Braus
Journal:  Front Microbiol       Date:  2021-05-24       Impact factor: 5.640

3.  Tracking the stochastic growth of bacterial populations in microfluidic droplets.

Authors:  Daniel Taylor; Nia Verdon; Peter Lomax; Rosalind J Allen; Simon Titmuss
Journal:  Phys Biol       Date:  2022-02-17       Impact factor: 2.959

4.  A multiphase theory for spreading microbial swarms and films.

Authors:  Siddarth Srinivasan; C Nadir Kaplan; L Mahadevan
Journal:  Elife       Date:  2019-04-30       Impact factor: 8.140

5.  Extraction of recombinant periplasmic proteins under industrially relevant process conditions: Selectivity and yield strongly depend on protein titer and methodology.

Authors:  Clemens Schimek; Esther Egger; Christopher Tauer; Gerald Striedner; Cécile Brocard; Monika Cserjan-Puschmann; Rainer Hahn
Journal:  Biotechnol Prog       Date:  2020-04-13

6.  Dimensionless parameter predicts bacterial prodrug success.

Authors:  Brandon Alexander Holt; McKenzie Tuttle; Yilin Xu; Melanie Su; Joachim J Røise; Xioajian Wang; Niren Murthy; Gabriel A Kwong
Journal:  Mol Syst Biol       Date:  2022-01       Impact factor: 11.429

7.  Suboptimal resource allocation in changing environments constrains response and growth in bacteria.

Authors:  Rohan Balakrishnan; Roshali T de Silva; Terence Hwa; Jonas Cremer
Journal:  Mol Syst Biol       Date:  2021-12       Impact factor: 11.429

8.  Chemotactic smoothing of collective migration.

Authors:  Tapomoy Bhattacharjee; Daniel B Amchin; Ricard Alert; Jenna Anne Ott; Sujit Sankar Datta
Journal:  Elife       Date:  2022-03-08       Impact factor: 8.140

9.  Development of Biopolymeric Hybrid Scaffold-Based on AAc/GO/nHAp/TiO2 Nanocomposite for Bone Tissue Engineering: In-Vitro Analysis.

Authors:  Muhammad Umar Aslam Khan; Wafa Shamsan Al-Arjan; Mona Saad Binkadem; Hassan Mehboob; Adnan Haider; Mohsin Ali Raza; Saiful Izwan Abd Razak; Anwarul Hasan; Rashid Amin
Journal:  Nanomaterials (Basel)       Date:  2021-05-17       Impact factor: 5.076

10.  Delayed antibiotic exposure induces population collapse in enterococcal communities with drug-resistant subpopulations.

Authors:  Kelsey M Hallinen; Jason Karslake; Kevin B Wood
Journal:  Elife       Date:  2020-03-24       Impact factor: 8.140
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