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Literature DB >> 16670439

Comparative sequencing of plant genomes: choices to make.

Scott Jackson¹, Steve Rounsley, Michael Purugganan.

Abstract

Mesh：

Year: 2006 PMID： 16670439 PMCID： PMC1456863 DOI： 10.1105/tpc.106.042192

Source DB: PubMed Journal: Plant Cell ISSN： 1040-4651 Impact factor: 11.277

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15 in total

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Authors:
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Review 2. Emerging technologies in DNA sequencing.

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Review 3. Toward the 1,000 dollars human genome.

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4. Where next for genome sequencing?

Authors: Peter Raven; Claude Fauquet; M S Swaminathan; Norman Borlaug; Cristián Samper
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5. Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants.

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Journal: Science Date: 2002-04-05 Impact factor: 47.728

7. A draft sequence of the rice genome (Oryza sativa L. ssp. japonica).

Authors: Stephen A Goff; Darrell Ricke; Tien-Hung Lan; Gernot Presting; Ronglin Wang; Molly Dunn; Jane Glazebrook; Allen Sessions; Paul Oeller; Hemant Varma; David Hadley; Don Hutchison; Chris Martin; Fumiaki Katagiri; B Markus Lange; Todd Moughamer; Yu Xia; Paul Budworth; Jingping Zhong; Trini Miguel; Uta Paszkowski; Shiping Zhang; Michelle Colbert; Wei-lin Sun; Lili Chen; Bret Cooper; Sylvia Park; Todd Charles Wood; Long Mao; Peter Quail; Rod Wing; Ralph Dean; Yeisoo Yu; Andrey Zharkikh; Richard Shen; Sudhir Sahasrabudhe; Alun Thomas; Rob Cannings; Alexander Gutin; Dmitry Pruss; Julia Reid; Sean Tavtigian; Jeff Mitchell; Glenn Eldredge; Terri Scholl; Rose Mary Miller; Satish Bhatnagar; Nils Adey; Todd Rubano; Nadeem Tusneem; Rosann Robinson; Jane Feldhaus; Teresita Macalma; Arnold Oliphant; Steven Briggs
Journal: Science Date: 2002-04-05 Impact factor: 47.728

8. High-diversity genes in the Arabidopsis genome.

Authors: Jennifer M Cork; Michael D Purugganan
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9. The map-based sequence of the rice genome.

Authors:
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10. Darwin's abominable mystery: Insights from a supertree of the angiosperms.

Authors: T Jonathan Davies; Timothy G Barraclough; Mark W Chase; Pamela S Soltis; Douglas E Soltis; Vincent Savolainen
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12 in total

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Authors: Angela R Cordle; Erin E Irish; Chi-Lien Cheng
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2. Comparative nucleotide diversity across North American and European populus species.

Authors: Mohamed Ismail; Raju Y Soolanayakanahally; Pär K Ingvarsson; Robert D Guy; Stefan Jansson; Salim N Silim; Yousry A El-Kassaby
Journal: J Mol Evol Date: 2012-05-06 Impact factor: 2.395

3. Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery.

Authors: Sukhjiwan Kaur; Noel O I Cogan; Luke W Pembleton; Maiko Shinozuka; Keith W Savin; Michael Materne; John W Forster
Journal: BMC Genomics Date: 2011-05-25 Impact factor: 3.969

4. SNP discovery by illumina-based transcriptome sequencing of the olive and the genetic characterization of Turkish olive genotypes revealed by AFLP, SSR and SNP markers.

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Journal: PLoS One Date: 2013-09-13 Impact factor: 3.240

5. Analyses of Old "Prokaryotic" Proteins Indicate Functional Diversification in Arabidopsis and Oryza sativa.

Authors: Anupama Singh; Minesh Jethva; Sneh L Singla-Pareek; Ashwani Pareek; Hemant R Kushwaha
Journal: Front Plant Sci Date: 2016-03-15 Impact factor: 5.753

6. Sim4cc: a cross-species spliced alignment program.

Authors: Leming Zhou; Mihaela Pertea; Arthur L Delcher; Liliana Florea
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7. Comparative analysis of expressed sequence tag (EST) libraries in the seagrass Zostera marina subjected to temperature stress.

Authors: Thorsten B H Reusch; Amelie S Veron; Christoph Preuss; January Weiner; Lothar Wissler; Alfred Beck; Sven Klages; Michael Kube; Richard Reinhardt; Erich Bornberg-Bauer
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8. A Dual-Color Tyr-FISH Method for Visualizing Genes/Markers on Plant Chromosomes to Create Integrated Genetic and Cytogenetic Maps.

Authors: Natalya Kudryavtseva; Aleksey Ermolaev; Gennady Karlov; Ilya Kirov; Masayoshi Shigyo; Shusei Sato; Ludmila Khrustaleva
Journal: Int J Mol Sci Date: 2021-05-30 Impact factor: 5.923

9. Insights into the Musa genome: syntenic relationships to rice and between Musa species.

Authors: Magali Lescot; Pietro Piffanelli; Ana Y Ciampi; Manuel Ruiz; Guillaume Blanc; Jim Leebens-Mack; Felipe R da Silva; Candice M R Santos; Angélique D'Hont; Olivier Garsmeur; Alberto D Vilarinhos; Hiroyuki Kanamori; Takashi Matsumoto; Catherine M Ronning; Foo Cheung; Brian J Haas; Ryan Althoff; Tammy Arbogast; Erin Hine; Georgios J Pappas; Takuji Sasaki; Manoel T Souza; Robert N G Miller; Jean-Christophe Glaszmann; Christopher D Town
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10. The Amborella genome: an evolutionary reference for plant biology.

Authors: Douglas E Soltis; Victor A Albert; Jim Leebens-Mack; Jeffrey D Palmer; Rod A Wing; Claude W dePamphilis; Hong Ma; John E Carlson; Naomi Altman; Sangtae Kim; P Kerr Wall; Andrea Zuccolo; Pamela S Soltis
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