Literature DB >> 16339375

Emerging technologies in DNA sequencing.

Michael L Metzker1.   

Abstract

Demand for DNA sequence information has never been greater, yet current Sanger technology is too costly, time consuming, and labor intensive to meet this ongoing demand. Applications span numerous research interests, including sequence variation studies, comparative genomics and evolution, forensics, and diagnostic and applied therapeutics. Several emerging technologies show promise of delivering next-generation solutions for fast and affordable genome sequencing. In this review article, the DNA polymerase-dependent strategies of Sanger sequencing, single nucleotide addition, and cyclic reversible termination are discussed to highlight recent advances and potential challenges these technologies face in their development for ultrafast DNA sequencing.

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Year:  2005        PMID: 16339375     DOI: 10.1101/gr.3770505

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  124 in total

Review 1.  Next-generation sequencing in the analysis of human microbiota: essential considerations for clinical application.

Authors:  Geraint B Rogers; Kenneth D Bruce
Journal:  Mol Diagn Ther       Date:  2010-12-01       Impact factor: 4.074

2.  On the Feasibility of Using the Intrinsic Fluorescence of Nucleotides for DNA Sequencing.

Authors:  Mustafa H Chowdhury; Krishanu Ray; Michael L Johnson; Stephen K Gray; James Pond; Joseph R Lakowicz
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2010-04-29       Impact factor: 4.126

3.  Source identification in two criminal cases using phylogenetic analysis of HIV-1 DNA sequences.

Authors:  Diane I Scaduto; Jeremy M Brown; Wade C Haaland; Derrick J Zwickl; David M Hillis; Michael L Metzker
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-15       Impact factor: 11.205

4.  Size Does Matter: Application-driven Approaches for Soil Metagenomics.

Authors:  Kavita S Kakirde; Larissa C Parsley; Mark R Liles
Journal:  Soil Biol Biochem       Date:  2010-11-01       Impact factor: 7.609

5.  Comparative sequencing of plant genomes: choices to make.

Authors:  Scott Jackson; Steve Rounsley; Michael Purugganan
Journal:  Plant Cell       Date:  2006-05       Impact factor: 11.277

6.  Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster.

Authors:  Stuart J Macdonald; Anthony D Long
Journal:  Genetics       Date:  2007-04-15       Impact factor: 4.562

7.  Anticipating the 1,000 dollar genome.

Authors:  Elaine R Mardis
Journal:  Genome Biol       Date:  2006       Impact factor: 13.583

8.  Short read fragment assembly of bacterial genomes.

Authors:  Mark J Chaisson; Pavel A Pevzner
Journal:  Genome Res       Date:  2007-12-14       Impact factor: 9.043

9.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

10.  Nanotechnologies applied to the analysis of the animal genome.

Authors:  P Ajmone Marsan; S Tramontana; R Mazza
Journal:  Vet Res Commun       Date:  2007-08       Impact factor: 2.459

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