Literature DB >> 16628500

Contrast between extensive variation of 28S rDNA and stability of 5S rDNA and telomeric repeats in the diploid-polyploid Squalius alburnoides complex and in its maternal ancestor Squalius pyrenaicus (Teleostei, Cyprinidae).

Marta Gromicho1, Jean-Pierre Coutanceau, Catherine Ozouf-Costaz, Maria João Collares-Pereira.   

Abstract

The diploid-polyploid Squalius alburnoides complex resulted from interspecific hybridization. The chromosomal mapping of 28S and 5S ribosomal genes and of (TTAGGG)n telomeric repeats was performed on specimens from the complex and from the sympatric bisexual species S. pyrenaicus (the complex maternal ancestor) as part of an investigation of the evolutionary relationships between genomic constitutions and the consequences of the ongoing polyploidization process in terms of chromosome reshaping. Contrasting results were obtained. While results with 5S rDNA and telomeric probes gave an impression of genomic stability, the variability detected with 28S rDNA probe suggested quite the opposite. The 5S rDNA probe mapped constantly to three chromosomes per haploid genome with apparently conserved locations in morphologically similar chromosomes; conversely, prominent intra- and inter-individual variations of 28S rDNA and of syntenic sites with 5S rDNA were detected with regard to number, size and location. Hypotheses for the causes of such polymorphisms are discussed. The terminal position of most 28S rDNA sites and the absence of detectable interstitial telomeric sequences suggest a mechanism that does not involve major chromosomal rearrangements. These fishes share similar patterns for the studied cytogenetic markers which may be taken as evidence of an apparent stability that may be hiding extensive and subtle genome variations that are possibly related to an ongoing evolutionary process of genome tetraploidization and speciation.

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Year:  2006        PMID: 16628500     DOI: 10.1007/s10577-006-1047-4

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  47 in total

1.  Autosomal and sex chromosomal polymorphisms with multiple rearrangements and a new karyotype in the genus Rhipidomys (Sigmodontinae, Rodentia).

Authors:  M J Silva; Y Yonenaga-Yassuda
Journal:  Hereditas       Date:  1999       Impact factor: 3.271

2.  Nucleolar organizing regions, 18S and 5S rDNA in Astyanax scabripinnis (Pisces, Characidae): populations distribution and functional diversity.

Authors:  D A Ferro; D M Néo; O Moreira-Filho; L A Bertollo
Journal:  Genetica       Date:  2000       Impact factor: 1.082

Review 3.  Nucleolar dominance: uniparental gene silencing on a multi-megabase scale in genetic hybrids.

Authors:  C S Pikaard
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076

4.  Conservation of the 5S-bearing chromosome pair and co-localization with major rDNA clusters in five species of Astyanax (Pisces, Characidae).

Authors:  L F Almeida-Toledo; C Ozouf-Costaz; F Foresti; C Bonillo; F Porto-Foresti; M F Z Daniel-Silva
Journal:  Cytogenet Genome Res       Date:  2002       Impact factor: 1.636

5.  Evolution of rRNA gene clusters and telomeric repeats during explosive genome repatterning in TATERILLUS X (Rodentia, Gerbillinae).

Authors:  G Dobigny; C Ozouf-Costaz; C Bonillo; V Volobouev
Journal:  Cytogenet Genome Res       Date:  2003       Impact factor: 1.636

6.  Conserved 5S and variable 45S rDNA chromosomal localisation revealed by FISH in Astyanax scabripinnis (Pisces, Characidae).

Authors:  Monique Mantovani; Luciano Douglas dos Santos Abel; Orlando Moreira-Filho
Journal:  Genetica       Date:  2005-03       Impact factor: 1.082

Review 7.  Ribosomal DNA: molecular evolution and phylogenetic inference.

Authors:  D M Hillis; M T Dixon
Journal:  Q Rev Biol       Date:  1991-12       Impact factor: 4.875

8.  Chromosomal localization and heterochromatin association of ribosomal RNA gene loci and silver-stained nucleolar organizer regions in salmonid fishes.

Authors:  A Fujiwara; S Abe; E Yamaha; F Yamazaki; M C Yoshida
Journal:  Chromosome Res       Date:  1998-09       Impact factor: 5.239

9.  Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution.

Authors:  K Song; P Lu; K Tang; T C Osborn
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

10.  Multiple ribosomal gene sites revealed by in situ hybridization of Xenopus rDNA to Triturus lampbrush chromosomes.

Authors:  G T Morgan; H C Macgregor; A Colman
Journal:  Chromosoma       Date:  1980       Impact factor: 4.316

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  19 in total

1.  Nucleotide variation and physical mapping of ribosomal genes using FISH in genus Tor (Pisces, Cyprinidae).

Authors:  Indra Mani; Ravindra Kumar; Mamta Singh; N S Nagpure; B Kushwaha; P K Srivastava; D S Krishna Rao; W S Lakra
Journal:  Mol Biol Rep       Date:  2010-11-23       Impact factor: 2.316

2.  Chromosomal localization of 18S and 5S rDNA using FISH in the genus Tor (Pisces, Cyprinidae).

Authors:  Mamta Singh; Ravindra Kumar; N S Nagpure; B Kushwaha; Indramani Gond; W S Lakra
Journal:  Genetica       Date:  2009-05-09       Impact factor: 1.082

3.  Systematic analysis and evolution of 5S ribosomal DNA in metazoans.

Authors:  J Vierna; S Wehner; C Höner zu Siederdissen; A Martínez-Lage; M Marz
Journal:  Heredity (Edinb)       Date:  2013-07-10       Impact factor: 3.821

4.  Molecular cytogenetic analysis of the Appenine endemic cyprinid fish Squalius lucumonis and three other Italian leuciscines using chromosome banding and FISH with rDNA probes.

Authors:  Anna Rita Rossi; Valentina Milana; Anne Kathrin Hett; Lorenzo Tancioni
Journal:  Genetica       Date:  2012-12-13       Impact factor: 1.082

Review 5.  Polyploidy in fungi: evolution after whole-genome duplication.

Authors:  Warren Albertin; Philippe Marullo
Journal:  Proc Biol Sci       Date:  2012-04-04       Impact factor: 5.349

6.  Chromosomes of European cyprinid fishes: comparative cytogenetics and chromosomal characteristics of ribosomal DNAs in nine Iberian chondrostomine species (Leuciscinae).

Authors:  Carla Sofia A Pereira; Petr Ráb; Maria João Collares-Pereira
Journal:  Genetica       Date:  2013-01-18       Impact factor: 1.082

7.  The 5S rDNA high dynamism in Diplodus sargus is a transposon-mediated mechanism. Comparison with other multigene families and Sparidae species.

Authors:  Manuel A Merlo; Ismael Cross; Manuel Manchado; Salvador Cárdenas; Laureana Rebordinos
Journal:  J Mol Evol       Date:  2013-01-26       Impact factor: 2.395

8.  Chromosome studies of European cyprinid fishes: interspecific homology of leuciscine cytotaxonomic marker-the largest subtelocentric chromosome pair as revealed by cross-species painting.

Authors:  Petr Ráb; Marie Rábová; Carla Sofia Pereira; Maria João Collares-Pereira; Sárka Pelikánová
Journal:  Chromosome Res       Date:  2008-08-19       Impact factor: 5.239

9.  Comparative molecular cytogenetic analysis of three Leuciscus species (Pisces, Cyprinidae) using chromosome banding and FISH with rDNA.

Authors:  Alicja Boron; Katarzyna Porycka; Daisuke Ito; Syuiti Abe; Lech Kirtiklis
Journal:  Genetica       Date:  2008-05-13       Impact factor: 1.082

10.  Introgressive hybridization as a promoter of genome reshuffling in natural homoploid fish hybrids (Cyprinidae, Leuciscinae).

Authors:  C S A Pereira; M A Aboim; P Ráb; M J Collares-Pereira
Journal:  Heredity (Edinb)       Date:  2013-11-13       Impact factor: 3.821

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