Literature DB >> 19430914

Chromosomal localization of 18S and 5S rDNA using FISH in the genus Tor (Pisces, Cyprinidae).

Mamta Singh1, Ravindra Kumar, N S Nagpure, B Kushwaha, Indramani Gond, W S Lakra.   

Abstract

Dual color fluorescence in situ hybridization (FISH) was performed to study the simultaneous chromosomal localization of 18S and 5S ribosomal genes in the genus Tor for the first time. The 18S and 5S rDNAs in four Tor species were amplified, sequenced and mapped on the metaphase chromosomes. The number and distribution of 18S and 5S rDNA clusters were examined on metaphase chromosome spreads using FISH. The specimens of T. chelynoides, T. putitora and T. progeneius showed six bright fluorescent signals of 18S rDNA and T. tor exhibited ten such signals. The 5S rDNA signals were present only on one pair of chromosomes in all the four Tor species. Ag-NORs were observed on two pairs of chromosomes in T. chelynoides, T. putitora, T. progeneius and four pairs in T. tor. Comparison of the observed 18S rDNA FISH signals and Ag-NORs strongly suggested a possible inactivation of NORs localized at the telomeres of a subtelocentric and telocentric chromosome pairs in all four species. The 5S rDNA contained an identical 120 bp long coding region and 81 bp long highly divergent non-transcribed spacers in all species examined. 18S and 5S rDNA sequencing and chromosomal localization can be a useful genetic marker in species identification as well as phylogenetic and evolutionary studies.

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Year:  2009        PMID: 19430914     DOI: 10.1007/s10709-009-9367-x

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  27 in total

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Journal:  Genetica       Date:  2000       Impact factor: 1.082

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7.  Controlled silver-staining of nucleolus organizer regions with a protective colloidal developer: a 1-step method.

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  12 in total

1.  Nucleotide variation and physical mapping of ribosomal genes using FISH in genus Tor (Pisces, Cyprinidae).

Authors:  Indra Mani; Ravindra Kumar; Mamta Singh; N S Nagpure; B Kushwaha; P K Srivastava; D S Krishna Rao; W S Lakra
Journal:  Mol Biol Rep       Date:  2010-11-23       Impact factor: 2.316

2.  Characterization of two freshwater silurid catfish using conventional and molecular cytogenetic techniques.

Authors:  Jyoti Verma; W S Lakra; B Kushwaha; M Sirajuddin; N S Nagpure; Ravindra Kumar
Journal:  J Genet       Date:  2011-08       Impact factor: 1.166

3.  Evidence of birth-and-death evolution of 5S rRNA gene in Channa species (Teleostei, Perciformes).

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Journal:  Parasitol Res       Date:  2019-09-04       Impact factor: 2.289

5.  Molecular cytogenetic analysis of the Appenine endemic cyprinid fish Squalius lucumonis and three other Italian leuciscines using chromosome banding and FISH with rDNA probes.

Authors:  Anna Rita Rossi; Valentina Milana; Anne Kathrin Hett; Lorenzo Tancioni
Journal:  Genetica       Date:  2012-12-13       Impact factor: 1.082

6.  Chromosome breakages associated with 45S ribosomal DNA sequences in spotted snakehead fish Channa punctatus.

Authors:  Mamta Singh; Anindya Sundar Barman
Journal:  Mol Biol Rep       Date:  2012-10-12       Impact factor: 2.316

7.  Are ribosomal DNA clusters rearrangement hotspots?: a case study in the genus Mus (Rodentia, Muridae).

Authors:  Benoîte Cazaux; Josette Catalan; Frédéric Veyrunes; Emmanuel Jp Douzery; Janice Britton-Davidian
Journal:  BMC Evol Biol       Date:  2011-05-13       Impact factor: 3.260

8.  Molecular cytogenetic analysis of the crucian carp, Carassius carassius (Linnaeus, 1758) (Teleostei, Cyprinidae), using chromosome staining and fluorescence in situ hybridisation with rDNA probes.

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9.  Unique nucleolar dominance patterns in distant hybrid lineage derived from Megalobrama Amblycephala × Culter Alburnus.

Authors:  Jun Xiao; Fangzhou Hu; Kaikun Luo; Wuhui Li; Shaojun Liu
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10.  The chromosomal constitution of fish hybrid lineage revealed by 5S rDNA FISH.

Authors:  Chun Zhang; Lihai Ye; Yiyi Chen; Jun Xiao; Yanhong Wu; Min Tao; Yamei Xiao; Shaojun Liu
Journal:  BMC Genet       Date:  2015-12-03       Impact factor: 2.797

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