Literature DB >> 16603345

Detection of colorectal cancer using MALDI-TOF serum protein profiling.

Mirre E de Noo1, Bart J A Mertens, Aliye Ozalp, Marco R Bladergroen, Martijn P J van der Werff, Cornelis J H van de Velde, Andre M Deelder, Rob A E M Tollenaar.   

Abstract

Serum protein profiling is a promising approach for classification of cancer versus non-cancer samples. The objective of our study was to assess the feasibility of mass spectrometry based protein profiling for the discrimination of colorectal cancer (CRC) patients from healthy individuals. In a randomized block design, pre-operative serum samples obtained from 66 colorectal cancer patients and 50 controls were used to generate MALDI-TOF protein profiles. After pre-processing of the spectra, linear discriminant analysis with double cross-validation was used to classify protein profiles. A total recognition rate (92.6%), sensitivity (95.2%) and specificity (90.0%) for the detection of CRC were shown. The area under the curve of the classifier was 97.3%, and demonstrated the high, significant separation power of the classifier. Double cross-validation shows that classification can be attributed to information in the protein profile. Although preliminary, the high sensitivity and specificity indicate the potential usefulness of serum protein profiles for the detection of colorectal cancer.

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Year:  2006        PMID: 16603345     DOI: 10.1016/j.ejca.2005.12.023

Source DB:  PubMed          Journal:  Eur J Cancer        ISSN: 0959-8049            Impact factor:   9.162


  27 in total

Review 1.  Screening for colorectal cancer: established and emerging modalities.

Authors:  Nikhil Pawa; Tan Arulampalam; John D Norton
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2011-11-01       Impact factor: 46.802

2.  Quality control based on isotopic distributions for high-throughput MALDI-TOF and MALDI-FTICR serum peptide profiling.

Authors:  Simone Nicolardi; Magnus Palmblad; Hans Dalebout; Marco Bladergroen; Rob A E M Tollenaar; André M Deelder; Yuri E M van der Burgt
Journal:  J Am Soc Mass Spectrom       Date:  2010-05-12       Impact factor: 3.109

3.  Detection of pancreatic cancer using serum protein profiling.

Authors:  Berit Velstra; Bert A Bonsing; Bart J Mertens; Yuri E M van der Burgt; Anouck Huijbers; Hans Vasen; Wilma E Mesker; André M Deelder; Rob A E M Tollenaar
Journal:  HPB (Oxford)       Date:  2012-11-30       Impact factor: 3.647

Review 4.  Current status and prospects of clinical proteomics studies on detection of colorectal cancer: hopes and fears.

Authors:  M E de Noo; R A E M Tollenaar; A M Deelder; L H Bouwman
Journal:  World J Gastroenterol       Date:  2006-11-07       Impact factor: 5.742

5.  Analysis of post-operative changes in serum protein expression profiles from colorectal cancer patients by MALDI-TOF mass spectrometry: a pilot methodological study.

Authors:  Christopher C L Liao; Anuja Mehta; Nicholas J Ward; Simon Marsh; Tan Arulampalam; John D Norton
Journal:  World J Surg Oncol       Date:  2010-04-26       Impact factor: 2.754

6.  Use of anchorchip-time-of-flight spectrometry technology to screen tumor biomarker proteins in serum for small cell lung cancer.

Authors:  Jie Du; Shuanying Yang; Xiuli Lin; Lina Bu; Yandong Nan; Shufen Huo; Wenli Shang
Journal:  Diagn Pathol       Date:  2010-09-20       Impact factor: 2.644

7.  Serum protein profiling and proteomics in autistic spectrum disorder using magnetic bead-assisted mass spectrometry.

Authors:  Regina Taurines; Edward Dudley; Alexander C Conner; Julia Grassl; Thomas Jans; Frank Guderian; Claudia Mehler-Wex; Andreas Warnke; Manfred Gerlach; Johannes Thome
Journal:  Eur Arch Psychiatry Clin Neurosci       Date:  2009-09-27       Impact factor: 5.270

8.  Establishment of a novel diagnostic model for Sjögren's syndrome by proteomic fingerprinting.

Authors:  Yuhui Li; Xiaolin Sun; Xuewu Zhang; Yuqin Yang; Rulin Jia; Xu Liu; Ru Li; Yanying Liu; Zhanguo Li
Journal:  Clin Rheumatol       Date:  2014-09-02       Impact factor: 2.980

Review 9.  Current and future molecular diagnostics in colorectal cancer and colorectal adenoma.

Authors:  Andy Hin-Fung Tsang; Ka-Ho Cheng; Apple Siu-Ping Wong; Simon Siu-Man Ng; Brigette Buig-Yue Ma; Charles Ming-Lok Chan; Nancy Bo-Yin Tsui; Lawrence Wing-Chi Chan; Benjamin Yat-Ming Yung; Sze-Chuen Cesar Wong
Journal:  World J Gastroenterol       Date:  2014-04-14       Impact factor: 5.742

10.  Biomarker discovery in MALDI-TOF serum protein profiles using discrete wavelet transformation.

Authors:  Theodore Alexandrov; Jens Decker; Bart Mertens; Andre M Deelder; Rob A E M Tollenaar; Peter Maass; Herbert Thiele
Journal:  Bioinformatics       Date:  2009-03-01       Impact factor: 6.937

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