Literature DB >> 16596705

Self-assembling protein arrays on DNA chips by auto-labeling fusion proteins with a single DNA address.

Maarten A Jongsma1, Ralph H G M Litjens.   

Abstract

The high-throughput deposition of recombinant proteins on chips, beads or biosensor devices would be greatly facilitated by the implementation of self-assembly concepts. DNA-directed immobilization via conjugation of proteins to an oligonucleotide would be preeminently suited for this purpose. Here, we present a unique method to attach a single DNA address to proteins in one step during the purification from the E. coli lysate by fusion to human O6-alkylguanine-DNA-alkyltransferase (SNAP-tag) and the Avitag. Use of the conjugates in converting a DNA chip into a protein chip by self assembly is demonstrated.

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Year:  2006        PMID: 16596705     DOI: 10.1002/pmic.200500654

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  16 in total

1.  Covalent protein-oligonucleotide conjugates by copper-free click reaction.

Authors:  Santoshkumar L Khatwani; Jun Sung Kang; Daniel G Mullen; Michael A Hast; Lorena S Beese; Mark D Distefano; T Andrew Taton
Journal:  Bioorg Med Chem       Date:  2012-05-17       Impact factor: 3.641

2.  Radioiodinated O(6)-Benzylguanine derivatives containing an azido function.

Authors:  Ganesan Vaidyanathan; Benjamin White; Donna J Affleck; Darryl McDougald; Michael R Zalutsky
Journal:  Nucl Med Biol       Date:  2010-10-27       Impact factor: 2.408

3.  Mushroom tyrosinase oxidizes tyrosine-rich sequences to allow selective protein functionalization.

Authors:  Marcus J C Long; Lizbeth Hedstrom
Journal:  Chembiochem       Date:  2012-07-17       Impact factor: 3.164

4.  The rate of polymerase release upon filling the gap between Okazaki fragments is inadequate to support cycling during lagging strand synthesis.

Authors:  Paul R Dohrmann; Carol M Manhart; Christopher D Downey; Charles S McHenry
Journal:  J Mol Biol       Date:  2011-10-01       Impact factor: 5.469

Review 5.  Chemoenzymatic method for glycomics: Isolation, identification, and quantitation.

Authors:  Shuang Yang; Abigail Rubin; Shadi Toghi Eshghi; Hui Zhang
Journal:  Proteomics       Date:  2015-11-06       Impact factor: 3.984

6.  Design of DNA-conjugated polypeptide-based capture probes for the anchoring of proteins to DNA matrices.

Authors:  Ryan M Schweller; Pamela E Constantinou; Nicholas W Frankel; Priyanka Narayan; Michael R Diehl
Journal:  Bioconjug Chem       Date:  2008-12       Impact factor: 4.774

7.  The availability of a recombinant anti-SNAP antibody in VHH format amplifies the application flexibility of SNAP-tagged proteins.

Authors:  Marisa Aliprandi; Eleonora Sparacio; Flavia Pivetta; Giuseppe Ossolengo; Roberta Maestro; Ario de Marco
Journal:  J Biomed Biotechnol       Date:  2010-10-17

Review 8.  The smart targeting of nanoparticles.

Authors:  Adam D Friedman; Sarah E Claypool; Rihe Liu
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

9.  Genetically encoded multispectral labeling of proteins with polyfluorophores on a DNA backbone.

Authors:  Vijay Singh; Shenliang Wang; Ke Min Chan; Spencer A Clark; Eric T Kool
Journal:  J Am Chem Soc       Date:  2013-04-16       Impact factor: 15.419

10.  A universal DNA-based protein detection system.

Authors:  Thua N N Tran; Jinhui Cui; Mark R Hartman; Songming Peng; Hisakage Funabashi; Faping Duan; Dayong Yang; John C March; John T Lis; Haixin Cui; Dan Luo
Journal:  J Am Chem Soc       Date:  2013-09-11       Impact factor: 15.419

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