Literature DB >> 16595627

A hidden metabolic pathway exposed.

Andrei Osterman1.   

Abstract

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Year:  2006        PMID： 16595627      PMCID： PMC1458624          DOI： 10.1073/pnas.0601119103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  18 in total

1.  A gene cluster involved in pyrimidine reductive catabolism from Brevibacillus agri NCHU1002.

Authors:  Chao-Hung Kao; Wen-Hwei Hsu
Journal:  Biochem Biophys Res Commun       Date:  2003-04-11       Impact factor: 3.575

Review 2.  Missing genes in metabolic pathways: a comparative genomics approach.

Authors:  Andrei Osterman; Ross Overbeek
Journal:  Curr Opin Chem Biol       Date:  2003-04       Impact factor: 8.822

3.  Metabolism of cytosine, thymine, uracil, and barbituric acid by bacterial enzymes.

Authors:  O HAYAISHI; A KORNBERG
Journal:  J Biol Chem       Date:  1952-05       Impact factor: 5.157

4.  Systematic mutagenesis of the Escherichia coli genome.

Authors:  Yisheng Kang; Tim Durfee; Jeremy D Glasner; Yu Qiu; David Frisch; Kelly M Winterberg; Frederick R Blattner
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

5.  Properties and regulation of pyrimidine catabolism in Escherichia coli.

Authors:  S Simaga; E Kos
Journal:  Int J Biochem       Date:  1981

6.  A combined algorithm for genome-wide prediction of protein function.

Authors:  E M Marcotte; M Pellegrini; M J Thompson; T O Yeates; D Eisenberg
Journal:  Nature       Date:  1999-11-04       Impact factor: 49.962

7.  Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.

Authors:  Doreen Dobritzsch; Stefano Ricagno; Gunter Schneider; Klaus D Schnackerz; Ylva Lindqvist
Journal:  J Biol Chem       Date:  2002-01-16       Impact factor: 5.157

8.  Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation.

Authors:  D P Zimmer; E Soupene; H L Lee; V F Wendisch; A B Khodursky; B J Peter; R A Bender; S Kustu
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

9.  Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states.

Authors:  Jennifer L Reed; Bernhard Ø Palsson
Journal:  Genome Res       Date:  2004-09       Impact factor: 9.043

Review 10.  From the sequence to cell modeling: comprehensive functional genomics in Escherichia coli.

Authors:  Hirotada Mori
Journal:  J Biochem Mol Biol       Date:  2004-01-31
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  8 in total

1.  The surprising Rut pathway: an unexpected way to derive nitrogen from pyrimidines.

Authors:  Rebecca E Parales; John L Ingraham
Journal:  J Bacteriol       Date:  2010-06-18       Impact factor: 3.490

Review 2.  Systematizing the generation of missing metabolic knowledge.

Authors:  Jeffrey D Orth; Bernhard Ø Palsson
Journal:  Biotechnol Bioeng       Date:  2010-10-15       Impact factor: 4.530

Review 3.  New metrics for comparative genomics.

Authors:  Michael Y Galperin; Eugene Kolker
Journal:  Curr Opin Biotechnol       Date:  2006-09-15       Impact factor: 9.740

Review 4.  Cohesion group approach for evolutionary analysis of TyrA, a protein family with wide-ranging substrate specificities.

Authors:  Carol A Bonner; Terrence Disz; Kaitlyn Hwang; Jian Song; Veronika Vonstein; Ross Overbeek; Roy A Jensen
Journal:  Microbiol Mol Biol Rev       Date:  2008-03       Impact factor: 11.056

5.  Catalysis of a flavoenzyme-mediated amide hydrolysis.

Authors:  Tathagata Mukherjee; Yang Zhang; Sameh Abdelwahed; Steven E Ealick; Tadhg P Begley
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

6.  Rhodobacter sphaeroides uses a reductive route via propionyl coenzyme A to assimilate 3-hydroxypropionate.

Authors:  Kathrin Schneider; Marie Asao; Michael S Carter; Birgit E Alber
Journal:  J Bacteriol       Date:  2011-11-04       Impact factor: 3.490

7.  Escherichia coli dihydropyrimidine dehydrogenase is a novel NAD-dependent heterotetramer essential for the production of 5,6-dihydrouracil.

Authors:  Ryota Hidese; Hisaaki Mihara; Tatsuo Kurihara; Nobuyoshi Esaki
Journal:  J Bacteriol       Date:  2010-12-17       Impact factor: 3.490

8.  The Rut pathway for pyrimidine degradation: novel chemistry and toxicity problems.

Authors:  Kwang-Seo Kim; Jeffrey G Pelton; William B Inwood; Ulla Andersen; Sydney Kustu; David E Wemmer
Journal:  J Bacteriol       Date:  2010-04-16       Impact factor: 3.490
  8 in total

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