Literature DB >> 20562306

The surprising Rut pathway: an unexpected way to derive nitrogen from pyrimidines.

Rebecca E Parales1, John L Ingraham.   

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Year:  2010        PMID： 20562306      PMCID： PMC2916418          DOI： 10.1128/JB.00573-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


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  9 in total

1.  Phenotype microarray analysis of Escherichia coli K-12 mutants with deletions of all two-component systems.

Authors:  Lu Zhou; Xiang-He Lei; Barry R Bochner; Barry L Wanner
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

2.  A hidden metabolic pathway exposed.

Authors:  Andrei Osterman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-04       Impact factor: 11.205

3.  Phenotype microarrays for high-throughput phenotypic testing and assay of gene function.

Authors:  B R Bochner; P Gadzinski; E Panomitros
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

4.  RutR is the uracil/thymine-sensing master regulator of a set of genes for synthesis and degradation of pyrimidines.

Authors:  Tomohiro Shimada; Kiyo Hirao; Ayako Kori; Kaneyoshi Yamamoto; Akira Ishihama
Journal:  Mol Microbiol       Date:  2007-10-05       Impact factor: 3.501

Review 5.  Degradation of purines and pyrimidines by microorganisms.

Authors:  G D Vogels; C Van der Drift
Journal:  Bacteriol Rev       Date:  1976-06

6.  The Rut pathway for pyrimidine degradation: novel chemistry and toxicity problems.

Authors:  Kwang-Seo Kim; Jeffrey G Pelton; William B Inwood; Ulla Andersen; Sydney Kustu; David E Wemmer
Journal:  J Bacteriol       Date:  2010-04-16       Impact factor: 3.490

7.  Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation.

Authors:  D P Zimmer; E Soupene; H L Lee; V F Wendisch; A B Khodursky; B J Peter; R A Bender; S Kustu
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

8.  Characterization of short-chain dehydrogenase/reductase homologues of Escherichia coli (YdfG) and Saccharomyces cerevisiae (YMR226C).

Authors:  Hisae Fujisawa; Shinji Nagata; Haruo Misono
Journal:  Biochim Biophys Acta       Date:  2003-01-31

9.  A previously undescribed pathway for pyrimidine catabolism.

Authors:  Kevin D Loh; Prasad Gyaneshwar; Eirene Markenscoff Papadimitriou; Rebecca Fong; Kwang-Seo Kim; Rebecca Parales; Zhongrui Zhou; William Inwood; Sydney Kustu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-15       Impact factor: 11.205
  9 in total
  8 in total

1.  Substrate selectivity of YgfU, a uric acid transporter from Escherichia coli.

Authors:  Konstantinos Papakostas; Stathis Frillingos
Journal:  J Biol Chem       Date:  2012-03-21       Impact factor: 5.157

2.  A multi-faceted analysis of RutD reveals a novel family of α/β hydrolases.

Authors:  Aleksandra A Knapik; Janusz J Petkowski; Zbyszek Otwinowski; Marcin T Cymborowski; David R Cooper; Karolina A Majorek; Maksymilian Chruszcz; Wanda M Krajewska; Wladek Minor
Journal:  Proteins       Date:  2012-06-30

3.  Pathway and enzyme redundancy in putrescine catabolism in Escherichia coli.

Authors:  Barbara L Schneider; Larry Reitzer
Journal:  J Bacteriol       Date:  2012-05-25       Impact factor: 3.490

4.  High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes.

Authors:  Thomas S Peat; Sahil Balotra; Matthew Wilding; Carol J Hartley; Janet Newman; Colin Scott
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

5.  Structural and biochemical characterization of the biuret hydrolase (BiuH) from the cyanuric acid catabolism pathway of Rhizobium leguminasorum bv. viciae 3841.

Authors:  Lygie Esquirol; Thomas S Peat; Matthew Wilding; Del Lucent; Nigel G French; Carol J Hartley; Janet Newman; Colin Scott
Journal:  PLoS One       Date:  2018-02-09       Impact factor: 3.240

6.  Comparative genome analysis reveals niche-specific genome expansion in Acinetobacter baumannii strains.

Authors:  Harshita Yakkala; Devyani Samantarrai; Michael Gribskov; Dayananda Siddavattam
Journal:  PLoS One       Date:  2019-06-13       Impact factor: 3.240

7.  Dual transcriptomic analysis reveals metabolic changes associated with differential persistence of human pathogenic bacteria in leaves of Arabidopsis and lettuce.

Authors:  Cristián Jacob; André C Velásquez; Nikhil A Josh; Matthew Settles; Sheng Yang He; Maeli Melotto
Journal:  G3 (Bethesda)       Date:  2021-12-08       Impact factor: 3.154

8.  The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification.

Authors:  Pieter De Maayer; Wai-Yin Chan; Jochen Blom; Stephanus N Venter; Brion Duffy; Theo H M Smits; Teresa A Coutinho
Journal:  BMC Genomics       Date:  2012-11-15       Impact factor: 3.969
  8 in total

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