Literature DB >> 16564705

Preparation of alpha-synuclein fibrils for solid-state NMR: expression, purification, and incubation of wild-type and mutant forms.

Kathryn D Kloepper1, Wendy S Woods, Kem A Winter, Julia M George, Chad M Rienstra.   

Abstract

We report the expression and purification of alpha-synuclein, a protein implicated in Parkinson's disease, from isotopically (13C, 15N) labeled bacterial growth media, as required for solid-state NMR structural studies. Expression from Escherichia coli (BL21(DE3)) was performed with a protocol optimized for time efficiency and yield. Chemical lysis, crude purification by ammonium sulfate precipitation, and two chromatography steps (hydrophobic interaction and size exclusion) yield 30-35 mg/L of growth medium. Purity is confirmed by gel electrophoresis and mass spectrometry. Furthermore, we demonstrate reproducible fibril growth by control of environmental incubation conditions. Highly resolved multidimensional solid-state NMR spectra indicate microscopic order throughout the majority of the AS fibril structure. The number of signals and intensities of well-resolved residue types (Thr, Ser, Ala, Gly, Val, and Ile) are consistent with a single conformation, which is reproducibly prepared by seeding consecutive preparations. Variations in the fibril growth rates and structural polymorphisms exhibited in the solid-state NMR spectra are minimized by careful control of incubation conditions.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16564705     DOI: 10.1016/j.pep.2006.02.009

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  25 in total

1.  Structured regions of α-synuclein fibrils include the early-onset Parkinson's disease mutation sites.

Authors:  Gemma Comellas; Luisel R Lemkau; Andrew J Nieuwkoop; Kathryn D Kloepper; Daniel T Ladror; Reika Ebisu; Wendy S Woods; Andrew S Lipton; Julia M George; Chad M Rienstra
Journal:  J Mol Biol       Date:  2011-06-21       Impact factor: 5.469

2.  Atomic resolution protein structure determination by three-dimensional transferred echo double resonance solid-state nuclear magnetic resonance spectroscopy.

Authors:  Andrew J Nieuwkoop; Benjamin J Wylie; W Trent Franks; Gautam J Shah; Chad M Rienstra
Journal:  J Chem Phys       Date:  2009-09-07       Impact factor: 3.488

3.  Addition of exogenous α-synuclein preformed fibrils to primary neuronal cultures to seed recruitment of endogenous α-synuclein to Lewy body and Lewy neurite-like aggregates.

Authors:  Laura A Volpicelli-Daley; Kelvin C Luk; Virginia M-Y Lee
Journal:  Nat Protoc       Date:  2014-08-14       Impact factor: 13.491

4.  Control of protein orientation on gold nanoparticles.

Authors:  Wayne Lin; Thomas Insley; Marcus D Tuttle; Lingyang Zhu; Deborah A Berthold; Petr Král; Chad M Rienstra; Catherine J Murphy
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2015-08-18       Impact factor: 4.126

5.  Structural features of α-synuclein amyloid fibrils revealed by Raman spectroscopy.

Authors:  Jessica D Flynn; Ryan P McGlinchey; Robert L Walker; Jennifer C Lee
Journal:  J Biol Chem       Date:  2017-11-30       Impact factor: 5.157

6.  Straightforward, effective calibration of SPINAL-64 decoupling results in the enhancement of sensitivity and resolution of biomolecular solid-state NMR.

Authors:  Gemma Comellas; Jakob J Lopez; Andrew J Nieuwkoop; Luisel R Lemkau; Chad M Rienstra
Journal:  J Magn Reson       Date:  2010-12-31       Impact factor: 2.229

7.  Mutant protein A30P α-synuclein adopts wild-type fibril structure, despite slower fibrillation kinetics.

Authors:  Luisel R Lemkau; Gemma Comellas; Kathryn D Kloepper; Wendy S Woods; Julia M George; Chad M Rienstra
Journal:  J Biol Chem       Date:  2012-02-09       Impact factor: 5.157

8.  Solid-state NMR spectroscopy reveals that water is nonessential to the core structure of alpha-synuclein fibrils.

Authors:  Kathryn D Kloepper; Kevin L Hartman; Daniel T Ladror; Chad M Rienstra
Journal:  J Phys Chem B       Date:  2007-11-07       Impact factor: 2.991

9.  Temperature-dependent sensitivity enhancement of solid-state NMR spectra of alpha-synuclein fibrils.

Authors:  Kathryn D Kloepper; Donghua H Zhou; Ying Li; Kem A Winter; Julia M George; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2007-11       Impact factor: 2.835

10.  Solid-state NMR analysis of membrane proteins and protein aggregates by proton detected spectroscopy.

Authors:  Donghua H Zhou; Andrew J Nieuwkoop; Deborah A Berthold; Gemma Comellas; Lindsay J Sperling; Ming Tang; Gautam J Shah; Elliott J Brea; Luisel R Lemkau; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2012-09-18       Impact factor: 2.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.