Literature DB >> 17985869

Solid-state NMR spectroscopy reveals that water is nonessential to the core structure of alpha-synuclein fibrils.

Kathryn D Kloepper1, Kevin L Hartman, Daniel T Ladror, Chad M Rienstra.   

Abstract

Protein aggregation is implicated in the etiology of numerous neurodegenerative diseases. An understanding of aggregation mechanisms is enhanced by atomic-resolution structural information, of which relatively little is currently available. Lewy bodies, the pathological hallmark of Parkinson's disease, contain large quantities of fibrillar alpha-synuclein (AS). Here we present solid-state NMR spectroscopy studies of dried AS fibrils. The spectra have high resolution and sensitivity, and the site-resolved chemical shifts agree very well with those previously observed for hydrated fibrils. The conserved chemical shifts indicate that bulk water is nonessential to the fibril core structure. Moreover, the sample preparation procedure yields major improvements in spectral sensitivity, without compromising spectral resolution. This advance will greatly assist the atomic-resolution structural analysis of AS fibrils.

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Year:  2007        PMID: 17985869      PMCID: PMC2551327          DOI: 10.1021/jp077036z

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  24 in total

1.  A structural model for Alzheimer's beta -amyloid fibrils based on experimental constraints from solid state NMR.

Authors:  Aneta T Petkova; Yoshitaka Ishii; John J Balbach; Oleg N Antzutkin; Richard D Leapman; Frank Delaglio; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-12       Impact factor: 11.205

2.  Structural organization of alpha-synuclein fibrils studied by site-directed spin labeling.

Authors:  Ani Der-Sarkissian; Christine C Jao; Jeannie Chen; Ralf Langen
Journal:  J Biol Chem       Date:  2003-06-18       Impact factor: 5.157

3.  Fibrils formed in vitro from alpha-synuclein and two mutant forms linked to Parkinson's disease are typical amyloid.

Authors:  K A Conway; J D Harper; P T Lansbury
Journal:  Biochemistry       Date:  2000-03-14       Impact factor: 3.162

4.  Mutation in the alpha-synuclein gene identified in families with Parkinson's disease.

Authors:  M H Polymeropoulos; C Lavedan; E Leroy; S E Ide; A Dehejia; A Dutra; B Pike; H Root; J Rubenstein; R Boyer; E S Stenroos; S Chandrasekharappa; A Athanassiadou; T Papapetropoulos; W G Johnson; A M Lazzarini; R C Duvoisin; G Di Iorio; L I Golbe; R L Nussbaum
Journal:  Science       Date:  1997-06-27       Impact factor: 47.728

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Amyloid fibers are water-filled nanotubes.

Authors:  M F Perutz; J T Finch; J Berriman; A Lesk
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

7.  Supramolecular structure in full-length Alzheimer's beta-amyloid fibrils: evidence for a parallel beta-sheet organization from solid-state nuclear magnetic resonance.

Authors:  John J Balbach; Aneta T Petkova; Nathan A Oyler; Oleg N Antzutkin; David J Gordon; Stephen C Meredith; Robert Tycko
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

8.  3D TEDOR NMR experiments for the simultaneous measurement of multiple carbon-nitrogen distances in uniformly (13)C,(15)N-labeled solids.

Authors:  Christopher P Jaroniec; Claudiu Filip; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2002-09-11       Impact factor: 15.419

9.  The new mutation, E46K, of alpha-synuclein causes Parkinson and Lewy body dementia.

Authors:  Juan J Zarranz; Javier Alegre; Juan C Gómez-Esteban; Elena Lezcano; Raquel Ros; Israel Ampuero; Lídice Vidal; Janet Hoenicka; Olga Rodriguez; Begoña Atarés; Verónica Llorens; Estrella Gomez Tortosa; Teodoro del Ser; David G Muñoz; Justo G de Yebenes
Journal:  Ann Neurol       Date:  2004-02       Impact factor: 10.422

10.  Chemical shift referencing in MAS solid state NMR.

Authors:  Corey R Morcombe; Kurt W Zilm
Journal:  J Magn Reson       Date:  2003-06       Impact factor: 2.229

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  18 in total

1.  Coupling of the non-amyloid-component (NAC) domain and the KTK(E/Q)GV repeats stabilize the α-synuclein fibrils.

Authors:  Liang Xu; Ruth Nussinov; Buyong Ma
Journal:  Eur J Med Chem       Date:  2016-01-25       Impact factor: 6.514

Review 2.  Prions and the potential transmissibility of protein misfolding diseases.

Authors:  Allison Kraus; Bradley R Groveman; Byron Caughey
Journal:  Annu Rev Microbiol       Date:  2013-06-28       Impact factor: 15.500

3.  Water Distribution, Dynamics, and Interactions with Alzheimer's β-Amyloid Fibrils Investigated by Solid-State NMR.

Authors:  Tuo Wang; Hyunil Jo; William F DeGrado; Mei Hong
Journal:  J Am Chem Soc       Date:  2017-04-21       Impact factor: 15.419

4.  An efficient method and device for transfer of semisolid materials into solid-state NMR spectroscopy rotors.

Authors:  Grant S Hisao; Michael A Harland; Robert A Brown; Deborah A Berthold; Thomas E Wilson; Chad M Rienstra
Journal:  J Magn Reson       Date:  2016-01-29       Impact factor: 2.229

5.  Conserved core of amyloid fibrils of wild type and A30P mutant α-synuclein.

Authors:  Min-Kyu Cho; Hai-Young Kim; Claudio O Fernandez; Stefan Becker; Markus Zweckstetter
Journal:  Protein Sci       Date:  2011-02       Impact factor: 6.725

6.  Structured regions of α-synuclein fibrils include the early-onset Parkinson's disease mutation sites.

Authors:  Gemma Comellas; Luisel R Lemkau; Andrew J Nieuwkoop; Kathryn D Kloepper; Daniel T Ladror; Reika Ebisu; Wendy S Woods; Andrew S Lipton; Julia M George; Chad M Rienstra
Journal:  J Mol Biol       Date:  2011-06-21       Impact factor: 5.469

7.  Atomic resolution protein structure determination by three-dimensional transferred echo double resonance solid-state nuclear magnetic resonance spectroscopy.

Authors:  Andrew J Nieuwkoop; Benjamin J Wylie; W Trent Franks; Gautam J Shah; Chad M Rienstra
Journal:  J Chem Phys       Date:  2009-09-07       Impact factor: 3.488

8.  Successive Stages of Amyloid-β Self-Assembly Characterized by Solid-State Nuclear Magnetic Resonance with Dynamic Nuclear Polarization.

Authors:  Alexey Potapov; Wai-Ming Yau; Rodolfo Ghirlando; Kent R Thurber; Robert Tycko
Journal:  J Am Chem Soc       Date:  2015-06-19       Impact factor: 15.419

9.  NMR Determination of Protein pK(a) Values in the Solid State.

Authors:  Heather L Frericks Schmidt; Gautam J Shah; Lindsay J Sperling; Chad M Rienstra
Journal:  J Phys Chem Lett       Date:  2010-05-04       Impact factor: 6.475

Review 10.  Solid-state NMR studies of amyloid fibril structure.

Authors:  Robert Tycko
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

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