Literature DB >> 16550305

Microbial ecology and biodiversity in permafrost.

Blaire Steven1, Richard Léveillé, Wayne H Pollard, Lyle G Whyte.   

Abstract

Permafrost represents 26% of terrestrial soil ecosystems; yet its biology, essentially microbiology, remains relatively unexplored. The permafrost environment is considered extreme because indigenous microorganisms must survive prolonged exposure to subzero temperatures and background radiation for geological time scales in a habitat with low water activity and extremely low rates of nutrient and metabolite transfer. Yet considerable numbers and biodiversity of bacteria exist in permafrost, some of which may be among the most ancient viable life on Earth. This review describes the permafrost environment as a microbial habitat and reviews recent studies examining microbial biodiversity found in permafrost as well as microbial growth and activity at ambient in situ subzero temperatures. These investigations suggest that functional microbial ecosystems exist within the permafrost environment and may have important implications on global biogeochemical processes as well as the search for past or extant life in permafrost presumably present on Mars and other bodies in our solar system.

Mesh:

Year:  2006        PMID: 16550305     DOI: 10.1007/s00792-006-0506-3

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  46 in total

1.  Community size and metabolic rates of psychrophilic sulfate-reducing bacteria in Arctic marine sediments.

Authors:  C Knoblauch; B B Jørgensen; J Harder
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

2.  Low-temperature recovery strategies for the isolation of bacteria from ancient permafrost sediments.

Authors:  T Vishnivetskaya; S Kathariou; J McGrath; D Gilichinsky; J M Tiedje
Journal:  Extremophiles       Date:  2000-06       Impact factor: 2.395

3.  Isolation of bacteria and 16S rDNAs from Lake Vostok accretion ice.

Authors:  B C Christner; E Mosley-Thompson; L G Thompson; J N Reeve
Journal:  Environ Microbiol       Date:  2001-09       Impact factor: 5.491

Review 4.  Nucleation of ice and its management in ecosystems.

Authors:  Felix Franks
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2003-03-15       Impact factor: 4.226

5.  Supercooled water brines within permafrost-an unknown ecological niche for microorganisms: a model for astrobiology.

Authors:  D Gilichinsky; E Rivkina; V Shcherbakova; K Laurinavichuis; J Tiedje
Journal:  Astrobiology       Date:  2003       Impact factor: 4.335

Review 6.  Low-temperature extremophiles and their applications.

Authors:  Ricardo Cavicchioli; Khawar S Siddiqui; David Andrews; Kevin R Sowers
Journal:  Curr Opin Biotechnol       Date:  2002-06       Impact factor: 9.740

7.  Carnobacterium pleistocenium sp. nov., a novel psychrotolerant, facultative anaerobe isolated from permafrost of the Fox Tunnel in Alaska.

Authors:  Elena V Pikuta; Damien Marsic; Asim Bej; Jane Tang; Paul Krader; Richard B Hoover
Journal:  Int J Syst Evol Microbiol       Date:  2005-01       Impact factor: 2.747

8.  Characterization of potential stress responses in ancient Siberian permafrost psychroactive bacteria.

Authors:  Monica A Ponder; Sarah J Gilmour; Peter W Bergholz; Carol A Mindock; Rawle Hollingsworth; Michael F Thomashow; James M Tiedje
Journal:  FEMS Microbiol Ecol       Date:  2005-01-11       Impact factor: 4.194

9.  Characterization of viable bacteria from Siberian permafrost by 16S rDNA sequencing.

Authors:  T Shi; R H Reeves; D A Gilichinsky; E I Friedmann
Journal:  Microb Ecol       Date:  1997 May-Jun       Impact factor: 4.552

10.  Novel psychrophilic anaerobic spore-forming bacterium from the overcooled water brine in permafrost: description Clostridium algoriphilum sp. nov.

Authors:  V A Shcherbakova; N A Chuvilskaya; E M Rivkina; S A Pecheritsyna; K S Laurinavichius; N E Suzina; G A Osipov; A M Lysenko; D A Gilichinsky; V K Akimenko
Journal:  Extremophiles       Date:  2005-04-21       Impact factor: 2.395

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  40 in total

1.  Microbial diversity and activity in hypersaline high Arctic spring channels.

Authors:  Chih-Ying Lay; Nadia C S Mykytczuk; Thomas D Niederberger; Christine Martineau; Charles W Greer; Lyle G Whyte
Journal:  Extremophiles       Date:  2012-01-14       Impact factor: 2.395

2.  Pattern of elemental release during the granite dissolution can be changed by aerobic heterotrophic bacterial strains isolated from Damma Glacier (central Alps) deglaciated granite sand.

Authors:  Aleš Lapanje; Celine Wimmersberger; Gerhard Furrer; Ivano Brunner; Beat Frey
Journal:  Microb Ecol       Date:  2011-11-22       Impact factor: 4.552

3.  Shifts in identity and activity of methanotrophs in arctic lake sediments in response to temperature changes.

Authors:  Ruo He; Matthew J Wooller; John W Pohlman; John Quensen; James M Tiedje; Mary Beth Leigh
Journal:  Appl Environ Microbiol       Date:  2012-04-20       Impact factor: 4.792

4.  Regeneration of whole fertile plants from 30,000-y-old fruit tissue buried in Siberian permafrost.

Authors:  Svetlana Yashina; Stanislav Gubin; Stanislav Maksimovich; Alexandra Yashina; Edith Gakhova; David Gilichinsky
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-21       Impact factor: 11.205

5.  The energetics of anabolism in natural settings.

Authors:  Douglas E LaRowe; Jan P Amend
Journal:  ISME J       Date:  2016-02-09       Impact factor: 10.302

6.  Characterization of the prokaryotic diversity in cold saline perennial springs of the Canadian high Arctic.

Authors:  Nancy N Perreault; Dale T Andersen; Wayne H Pollard; Charles W Greer; Lyle G Whyte
Journal:  Appl Environ Microbiol       Date:  2007-01-12       Impact factor: 4.792

7.  Phylogenetic analysis of bacteria preserved in a permafrost ice wedge for 25,000 years.

Authors:  Taiki Katayama; Michiko Tanaka; Jun Moriizumi; Toshio Nakamura; Anatoli Brouchkov; Thomas A Douglas; Masami Fukuda; Fusao Tomita; Kozo Asano
Journal:  Appl Environ Microbiol       Date:  2007-02-09       Impact factor: 4.792

Review 8.  Coping with our cold planet.

Authors:  Debora Frigi Rodrigues; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2008-01-18       Impact factor: 4.792

9.  Cultivation of anaerobic and facultatively anaerobic bacteria from spacecraft-associated clean rooms.

Authors:  Michaela Stieglmeier; Reinhard Wirth; Gerhard Kminek; Christine Moissl-Eichinger
Journal:  Appl Environ Microbiol       Date:  2009-04-10       Impact factor: 4.792

10.  Bacterial growth at -15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1.

Authors:  Nadia C S Mykytczuk; Simon J Foote; Chris R Omelon; Gordon Southam; Charles W Greer; Lyle G Whyte
Journal:  ISME J       Date:  2013-02-07       Impact factor: 10.302

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