Literature DB >> 17293514

Phylogenetic analysis of bacteria preserved in a permafrost ice wedge for 25,000 years.

Taiki Katayama1, Michiko Tanaka, Jun Moriizumi, Toshio Nakamura, Anatoli Brouchkov, Thomas A Douglas, Masami Fukuda, Fusao Tomita, Kozo Asano.   

Abstract

Phylogenetic analysis of bacteria preserved within an ice wedge from the Fox permafrost tunnel was undertaken by cultivation and molecular techniques. The radiocarbon age of the ice wedge was determined. Our results suggest that the bacteria in the ice wedge adapted to the frozen conditions have survived for 25,000 years.

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Year:  2007        PMID: 17293514      PMCID: PMC1855676          DOI: 10.1128/AEM.01715-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  31 in total

1.  Reproduction and metabolism at - 10 degrees C of bacteria isolated from Siberian permafrost.

Authors:  Corien Bakermans; Alexandre I Tsapin; Virginia Souza-Egipsy; David A Gilichinsky; Kenneth H Nealson
Journal:  Environ Microbiol       Date:  2003-04       Impact factor: 5.491

2.  Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk.

Authors:  Fumio Inagaki; Masae Suzuki; Ken Takai; Hanako Oida; Tatsuhiko Sakamoto; Kaori Aoki; Kenneth H Nealson; Koki Horikoshi
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

3.  Phylogenetic and physiological diversity of microorganisms isolated from a deep greenland glacier ice core.

Authors:  V I Miteva; P P Sheridan; J E Brenchley
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

4.  Fluctuation of bacteria isolated from elm tissues during different seasons and from different plant organs.

Authors:  Stefano Mocali; Emanuela Bertelli; Francescopaolo Di Cello; Alessio Mengoni; Alessandra Sfalanga; Francesca Viliani; Anna Caciotti; Stefania Tegli; Giuseppe Surico; Renato Fani
Journal:  Res Microbiol       Date:  2003-03       Impact factor: 3.992

5.  Hydrocarbon contamination changes the bacterial diversity of soil from around Scott Base, Antarctica.

Authors:  David J Saul; Jackie M Aislabie; Caroline E Brown; Lisa Harris; Julia M Foght
Journal:  FEMS Microbiol Ecol       Date:  2004-12-23       Impact factor: 4.194

6.  Luteococcus peritonei sp. nov., isolated from the human peritoneum.

Authors:  M D Collins; P A Lawson; N Nikolaitchouk; E Falsen
Journal:  Int J Syst Evol Microbiol       Date:  2000-01       Impact factor: 2.747

7.  Taxonomic study on nonpathogenic streptomycetes isolated from common scab lesions on potato tubers.

Authors:  C L Doumbou; V Akimov; M Côté; P M Charest; C Beaulieu
Journal:  Syst Appl Microbiol       Date:  2001-11       Impact factor: 4.022

8.  Description of Microbacterium foliorum sp. nov. and Microbacterium phyllosphaerae sp. nov., isolated from the phyllosphere of grasses and the surface litter after mulching the sward, and reclassification of Aureobacterium resistens (Funke et al. 1998) as Microbacterium resistens comb. nov..

Authors:  U Behrendt; A Ulrich; P Schumann
Journal:  Int J Syst Evol Microbiol       Date:  2001-07       Impact factor: 2.747

9.  Arthrobacter roseus sp. nov., a psychrophilic bacterium isolated from an antarctic cyanobacterial mat sample.

Authors:  G S N Reddy; J S S Prakash; G I Matsumoto; E Stackebrandt; S Shivaji
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

10.  Coaggregation among nonflocculating bacteria isolated from activated sludge.

Authors:  Anushree Malik; Masashi Sakamoto; Shohei Hanazaki; Masamitsu Osawa; Takanori Suzuki; Masaki Tochigi; Kazuo Kakii
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

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  16 in total

Review 1.  Microbial Cretaceous park: biodiversity of microbial fossils entrapped in amber.

Authors:  Ana Martín-González; Jacek Wierzchos; Juan C Gutiérrez; Jesús Alonso; Carmen Ascaso
Journal:  Naturwissenschaften       Date:  2009-02-12

2.  Removal of Exogenous Materials from the Outer Portion of Frozen Cores to Investigate the Ancient Biological Communities Harbored Inside.

Authors:  Robyn A Barbato; Natàlia Garcia-Reyero; Karen Foley; Robert Jones; Zoe Courville; Thomas Douglas; Edward Perkins; Charles M Reynolds
Journal:  J Vis Exp       Date:  2016-07-03       Impact factor: 1.355

3.  Prokaryotic community in Pleistocene ice wedges of Mammoth Mountain.

Authors:  Andrey Rakitin; Aleksey Beletsky; Andrey Mardanov; Natalya Surgucheva; Vladimir Sorokin; Mariya Cherbunina; Anatoli Brouchkov; Andrey Mulyukin; Svetlana Filippova
Journal:  Extremophiles       Date:  2019-10-12       Impact factor: 2.395

4.  Variation with depth of the abundance, diversity and pigmentation of culturable bacteria in a deep ice core from the Yuzhufeng Glacier, Tibetan Plateau.

Authors:  Liang Shen; Yongqin Liu; Ninglian Wang; Nianzhi Jiao; Baiqing Xu; Xiaobo Liu
Journal:  Extremophiles       Date:  2017-10-25       Impact factor: 2.395

5.  Draft Genome Sequence of Bacillus cereus Strain F, Isolated from Ancient Permafrost.

Authors:  Evgeniy V Brenner; Anatoli V Brouchkov; Alexander M Kurilshikov; Gennady I Griva; Elena Kashuba; Vladimir I Kashuba; O Melefors; Vladimir E Repin; Vladimir P Melnikov; Valentin V Vlassov
Journal:  Genome Announc       Date:  2013-08-01

6.  Increase in Bacterial Colony Formation from a Permafrost Ice Wedge Dosed with a Tomitella biformata Recombinant Resuscitation-Promoting Factor Protein.

Authors:  Indun Dewi Puspita; Wataru Kitagawa; Yoichi Kamagata; Michiko Tanaka; Cindy H Nakatsu
Journal:  Microbes Environ       Date:  2015-04-04       Impact factor: 2.912

Review 7.  Carnobacterium: positive and negative effects in the environment and in foods.

Authors:  Jørgen J Leisner; Birgit Groth Laursen; Hervé Prévost; Djamel Drider; Paw Dalgaard
Journal:  FEMS Microbiol Rev       Date:  2007-09       Impact factor: 16.408

8.  Draft Genome Sequence of Tomitella biformata AHU 1821T, Isolated from a Permafrost Ice Wedge in Alaska.

Authors:  Kentaro Funo; Wataru Kitagawa; Michiko Tanaka; Teruo Sone; Kozo Asano; Yoichi Kamagata
Journal:  Genome Announc       Date:  2014-02-13

9.  Isolation and characterization of bacteria from ancient siberian permafrost sediment.

Authors:  De-Chao Zhang; Anatoli Brouchkov; Gennady Griva; Franz Schinner; Rosa Margesin
Journal:  Biology (Basel)       Date:  2013-01-10

10.  Draft Genome Sequence of Agreia bicolorata Strain AC-1804, a Producer of Large Amounts of Carotenoid Pigments, Isolated from Narrow Reed Grass Infected by the Phytoparasitic Nematode.

Authors:  Ilya Vasilyev; Maria Siniagina; Sergey Malanin; Eugenia Boulygina; Tatiana Grygoryeva; Dina Yarullina; Olga Ilinskaya
Journal:  Genome Announc       Date:  2015-12-03
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