Literature DB >> 16547061

Liberation of zinc-containing L31 (RpmE) from ribosomes by its paralogous gene product, YtiA, in Bacillus subtilis.

Genki Akanuma1, Hideaki Nanamiya, Yousuke Natori, Naofumi Nomura, Fujio Kawamura.   

Abstract

We have found that alternative localization of two types of L31 ribosomal protein, RpmE and YtiA, is controlled by the intracellular concentration of zinc in Bacillus subtilis. The detailed mechanisms for the alternation of L31 proteins under zinc-deficient conditions were previously unknown. To obtain further information about this regulatory mechanism, we have studied the stability of RpmE in vivo and the binding affinity of these proteins to ribosomes in vitro, and we have found that liberation of RpmE from ribosomes is triggered by the expression of ytiA, which is induced by the derepression of Zur under zinc-deficient conditions.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16547061      PMCID: PMC1428384          DOI: 10.1128/JB.188.7.2715-2720.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  18 in total

1.  Femtomolar sensitivity of metalloregulatory proteins controlling zinc homeostasis.

Authors:  C E Outten; T V O'Halloran
Journal:  Science       Date:  2001-06-07       Impact factor: 47.728

2.  Functional analysis of the Bacillus subtilis Zur regulon.

Authors:  Ahmed Gaballa; Tao Wang; Rick W Ye; John D Helmann
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

3.  Rapid orientated cloning in a shuttle vector allowing modulated gene expression in Bacillus subtilis.

Authors:  P Joseph; J R Fantino; M L Herbaud; F Denizot
Journal:  FEMS Microbiol Lett       Date:  2001-11-27       Impact factor: 2.742

4.  Characterization of Escherichia coli 50S ribosomal protein L31.

Authors:  A J Eistetter; P D Butler; R R Traut; T G Fanning
Journal:  FEMS Microbiol Lett       Date:  1999-11-15       Impact factor: 2.742

5.  The genome sequence of the extreme thermophile Thermus thermophilus.

Authors:  Anke Henne; Holger Brüggemann; Carsten Raasch; Arnim Wiezer; Thomas Hartsch; Heiko Liesegang; Andre Johann; Tanja Lienard; Olivia Gohl; Rosa Martinez-Arias; Carsten Jacobi; Vytaute Starkuviene; Silke Schlenczeck; Silke Dencker; Robert Huber; Hans-Peter Klenk; Wilfried Kramer; Rainer Merkl; Gerhard Gottschalk; Hans-Joachim Fritz
Journal:  Nat Biotechnol       Date:  2004-04-04       Impact factor: 54.908

6.  Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis.

Authors:  A Gaballa; J D Helmann
Journal:  J Bacteriol       Date:  1998-11       Impact factor: 3.490

7.  Zinc is a key factor in controlling alternation of two types of L31 protein in the Bacillus subtilis ribosome.

Authors:  Hideaki Nanamiya; Genki Akanuma; Yousuke Natori; Rikinori Murayama; Saori Kosono; Toshiaki Kudo; Kazuo Kobayashi; Naotake Ogasawara; Seung-Moon Park; Kozo Ochi; Fujio Kawamura
Journal:  Mol Microbiol       Date:  2004-04       Impact factor: 3.501

8.  Comparative genomics of bacterial zinc regulons: enhanced ion transport, pathogenesis, and rearrangement of ribosomal proteins.

Authors:  Ekaterina M Panina; Andrey A Mironov; Mikhail S Gelfand
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-06       Impact factor: 11.205

9.  spoIVH (ykvV), a requisite cortex formation gene, is expressed in both sporulating compartments of Bacillus subtilis.

Authors:  Daisuke Imamura; Kazuo Kobayashi; Junichi Sekiguchi; Naotake Ogasawara; Michio Takeuchi; Tsutomu Sato
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

10.  Two C or not two C: recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins.

Authors:  K S Makarova; V A Ponomarev; E V Koonin
Journal:  Genome Biol       Date:  2001-08-30       Impact factor: 13.583

View more
  40 in total

Review 1.  Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation.

Authors:  Sabeeha S Merchant; John D Helmann
Journal:  Adv Microb Physiol       Date:  2012       Impact factor: 3.517

2.  Bacillus subtilis FolE is sustained by the ZagA zinc metallochaperone and the alarmone ZTP under conditions of zinc deficiency.

Authors:  Pete Chandrangsu; Xiaojuan Huang; Ahmed Gaballa; John D Helmann
Journal:  Mol Microbiol       Date:  2019-06-11       Impact factor: 3.501

Review 3.  Comparative genomic reconstruction of transcriptional regulatory networks in bacteria.

Authors:  Dmitry A Rodionov
Journal:  Chem Rev       Date:  2007-07-18       Impact factor: 60.622

4.  Regulation of the Bacillus subtilis yciC gene and insights into the DNA-binding specificity of the zinc-sensing metalloregulator Zur.

Authors:  Scott E Gabriel; Faith Miyagi; Ahmed Gaballa; John D Helmann
Journal:  J Bacteriol       Date:  2008-03-14       Impact factor: 3.490

5.  Contributions of Zur-controlled ribosomal proteins to growth under zinc starvation conditions.

Authors:  Scott E Gabriel; John D Helmann
Journal:  J Bacteriol       Date:  2009-07-31       Impact factor: 3.490

6.  The zinc-responsive regulator Zur controls expression of the coelibactin gene cluster in Streptomyces coelicolor.

Authors:  Dimitris Kallifidas; Ben Pascoe; Gillian A Owen; Claire M Strain-Damerell; Hee-Jeon Hong; Mark S B Paget
Journal:  J Bacteriol       Date:  2009-11-13       Impact factor: 3.490

7.  Graded expression of zinc-responsive genes through two regulatory zinc-binding sites in Zur.

Authors:  Jung-Ho Shin; Hoi Jong Jung; Young Jun An; Yoo-Bok Cho; Sun-Shin Cha; Jung-Hye Roe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-07       Impact factor: 11.205

8.  Tissue dual RNA-seq allows fast discovery of infection-specific functions and riboregulators shaping host-pathogen transcriptomes.

Authors:  Aaron M Nuss; Michael Beckstette; Maria Pimenova; Carina Schmühl; Wiebke Opitz; Fabio Pisano; Ann Kathrin Heroven; Petra Dersch
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

9.  The zinc-responsive regulon of Neisseria meningitidis comprises 17 genes under control of a Zur element.

Authors:  Marie-Christin Pawlik; Kerstin Hubert; Biju Joseph; Heike Claus; Christoph Schoen; Ulrich Vogel
Journal:  J Bacteriol       Date:  2012-10-05       Impact factor: 3.490

10.  Characterization of Zur-dependent genes and direct Zur targets in Yersinia pestis.

Authors:  Yingli Li; Yefeng Qiu; He Gao; Zhaobiao Guo; Yanping Han; Yajun Song; Zongmin Du; Xiaoyi Wang; Dongsheng Zhou; Ruifu Yang
Journal:  BMC Microbiol       Date:  2009-06-25       Impact factor: 3.605

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.