| Literature DB >> 16545129 |
Abstract
Cellulosimicrobium cellulans (also known with the synonyms Cellulomonas cellulans, Oerskovia xanthineolytica, and Arthrobacter luteus) is an actinomycete that excretes yeast cell wall lytic enzyme complexes containing endo-beta-1,3-glucanases [EC 3.2.1.39 and 3.2.1.6] as key constituents. Three genes encoding endo-beta-1,3-glucanases from two C. cellulans strains have been cloned and characterised over the past years. The betaglII and betaglIIA genes from strain DSM 10297 (also known as O. xanthineolytica LL G109) encoded proteins of 40.8 and 28.6 kDa, respectively, whereas the beta-1,3-glucanase gene from strain ATCC 21606 (also known as A. luteus 73-14) encoded a 54.5 kDa protein. Alignment of their deduced amino acid sequences reveal that betaglII and betaglIIA have catalytic domains assigned to family 16 of glycosyl hydrolases, whereas the catalytic domain from the 54.5 kDa glucanase belongs to family 64. Notably, both betaglII and the 54.5 kDa beta-1,3-glucanase are multidomain proteins, having a lectin-like C-terminal domain that has been assigned to family 13 of carbohydrate binding modules, and that confers to beta-1,3-glucanases the ability to lyse viable yeast cells. Furthermore, betaglII may also undergo posttranslational proteolytic processing of its C-terminal domain, resulting in a truncated enzyme retaining its glucanase activity but with very low yeast-lytic activity. In this review, the diversity in terms of structural and functional characteristics of the C. cellulans beta-1,3-glucanases has been compiled and compared.Entities:
Year: 2006 PMID: 16545129 PMCID: PMC1458353 DOI: 10.1186/1475-2859-5-10
Source DB: PubMed Journal: Microb Cell Fact ISSN: 1475-2859 Impact factor: 5.328
Summary of β-1,3-glucanases from Cellulosimicrobium cellulans
| laminarin | yeast glucan | laminarin | yeast glucan | yeast cells | |||||||
| 16 | 27.2 | 4.85~5.0 | 0.95 | 2.5 | 6.0 | 8.0 | 65 | very low | 21, 22 | ||
| rβglII | 16 | 40.8 | 6.3 | 2.75 | 8 | 40 | 20 | ||||
| rβglIIt | 16 | 27~30 | 4.8 | 20 | |||||||
| rβglII | 16 | 28.6 | 3.8~4.0 | ~4.0 | 18 | ||||||
| Native β-1,3- glucanase | 16 | 40 | 6.5 | 7.5 | 5.5 | 60 | high | 26 | |||
| Native β-1,3- glucanase | 64 | 54.5 | 5.9 | 0.4 | 6.0 | 7.5~8.0 | high | 15 | |||
| rβ-1,3- glucanase | 64 | 54.5 | high | 16 | |||||||
| rβ-1,3- glucanase(t) | 64 | 42 | 6.1 | absent | 16 | ||||||
Strain ATCC21606 is also known as A. luteus 73/14
Strain DSM10297 is also known as O. xanthineolytica LL-G109
Assuming a molecular weight of 4000 for laminarin
Using S. cerevisiae cells as substrate
at 30°C
at 37°C
estimated from SDS-PAGE analysis
needs 2-mercaptoethanol
r recombinant form
t truncated form
Figure 1Structural organisation of the Family 16 catalytic domain (blue boxes), family 64 catalytic domains and CBM13 domains (green boxes) are depicted for each enzyme. The β-1,3-glucanase from strain TK-1 has not been fully sequenced and, therefore, its putative CBM domain (if present) has not been assigned. The vertical arrow indicates the proteolytic cleavage of βglII yielding its catalytically active truncated form.
Figure 2Amino acid sequence alignments of family 13 carbohydrate binding modules. Sequences were deduced from the following GenBank accession numbers: C. cellulans DSM 10297 βglII glucanase (AF052745) [19] (indicated as C. cellulans 1); C. cellulans ATCC 21606 β-1,3-glucanase (M60826) [16] (indicated as C. cellulans 2), Ricinus comunis agglutinin β-chain (M12089) [42], Ricinus comunis ricin β-chain (X52908) [43], Streptomyces thermoviolaceus xylanase I (AB110643) [49], Streptomyces lividans α-arabinofuranosidase and xylanase A (M64551) [51], and Rarobacter faecitabidus Protease I (D10753) [41]. Comparison of the βglII CBM amino acid sequence with related CBMs. The amino acid residues conserved in all of the sequences (boldface), the residues involved in galactose binding in the ricin β-chain subdomains α 1 and γ2, and the corresponding analogous positions in all the subdomains of the aligned sequences (in red), conserved residues that form the hydrophobic core of each ricin β-chain subdomain (in blue), and conserved Cys residues (black background) are marked. Sequence identity values (in %) are referred to the C. cellulans βglII sequence. (A) Sequence similarity of the R1, R2, and R3 subdomains of the βglII CBM, and the subdomains α 1 and γ2 of the ricin β-chain.