Literature DB >> 16545103

DNA mimicry by proteins.

D T F Dryden1, M R Tock.   

Abstract

It has been discovered recently, via structural and biophysical analyses, that proteins can mimic DNA structures in order to inhibit proteins that would normally bind to DNA. Mimicry of the phosphate backbone of DNA, the hydrogen-bonding properties of the nucleotide bases and the bending and twisting of the DNA double helix are all present in the mimics discovered to date. These mimics target a range of proteins and enzymes such as DNA restriction enzymes, DNA repair enzymes, DNA gyrase and nucleosomal and nucleoid-associated proteins. The unusual properties of these protein DNA mimics may provide a foundation for the design of targeted inhibitors of DNA-binding proteins.

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Year:  2006        PMID: 16545103     DOI: 10.1042/BST20060317

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  17 in total

1.  The nuclease a-inhibitor complex is characterized by a novel metal ion bridge.

Authors:  Mahua Ghosh; Gregor Meiss; Alfred M Pingoud; Robert E London; Lars C Pedersen
Journal:  J Biol Chem       Date:  2006-11-30       Impact factor: 5.157

Review 2.  The phage-host arms race: shaping the evolution of microbes.

Authors:  Adi Stern; Rotem Sorek
Journal:  Bioessays       Date:  2011-01       Impact factor: 4.345

3.  The T4 phage DNA mimic protein Arn inhibits the DNA binding activity of the bacterial histone-like protein H-NS.

Authors:  Chun-Han Ho; Hao-Ching Wang; Tzu-Ping Ko; Yuan-Chih Chang; Andrew H-J Wang
Journal:  J Biol Chem       Date:  2014-08-12       Impact factor: 5.157

4.  Antigen is required for maturation and activation of pathogenic anti-DNA antibodies and systemic inflammation.

Authors:  Jeganathan Venkatesh; Hajime Yoshifuji; Daisuke Kawabata; Prameladevi Chinnasamy; Anfisa Stanevsky; Christine M Grimaldi; Joel Cohen-Solal; Betty Diamond
Journal:  J Immunol       Date:  2011-03-28       Impact factor: 5.422

5.  Stability, denaturation and refolding of Mycobacterium tuberculosis MfpA, a DNA mimicking protein that confers antibiotic resistance.

Authors:  Sergei Khrapunov; Michael Brenowitz
Journal:  Biophys Chem       Date:  2011-05-05       Impact factor: 2.352

Review 6.  The Discovery, Mechanisms, and Evolutionary Impact of Anti-CRISPRs.

Authors:  Adair L Borges; Alan R Davidson; Joseph Bondy-Denomy
Journal:  Annu Rev Virol       Date:  2017-07-27       Impact factor: 10.431

7.  De novo design of protein mimics of B-DNA.

Authors:  Deniz Yüksel; Piero R Bianco; Krishna Kumar
Journal:  Mol Biosyst       Date:  2016-01

8.  A DNA mimic: the structure and mechanism of action for the anti-repressor protein AbbA.

Authors:  Ashley T Tucker; Benjamin G Bobay; Allison V Banse; Andrew L Olson; Erik J Soderblom; M Arthur Moseley; Richele J Thompson; Kristen M Varney; Richard Losick; John Cavanagh
Journal:  J Mol Biol       Date:  2014-02-15       Impact factor: 5.469

9.  Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance.

Authors:  Stephen A McMahon; Gareth A Roberts; Kenneth A Johnson; Laurie P Cooper; Huanting Liu; John H White; Lester G Carter; Bansi Sanghvi; Muse Oke; Malcolm D Walkinshaw; Garry W Blakely; James H Naismith; David T F Dryden
Journal:  Nucleic Acids Res       Date:  2009-06-08       Impact factor: 16.971

10.  Interaction between the transactivation domain of p53 and PC4 exemplifies acidic activation domains as single-stranded DNA mimics.

Authors:  Sridharan Rajagopalan; Antonina Andreeva; Daniel P Teufel; Stefan M Freund; Alan R Fersht
Journal:  J Biol Chem       Date:  2009-06-12       Impact factor: 5.157

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