Literature DB >> 16524838

Transcriptional noise and cellular heterogeneity in mammalian macrophages.

S Ramsey1, A Ozinsky, A Clark, K D Smith, P de Atauri, V Thorsson, D Orrell, H Bolouri.   

Abstract

Transcriptional noise is known to play a crucial role in heterogeneity in bacteria and yeast. Mammalian macrophages are known to exhibit cell-to-cell variation in their responses to pathogens, but the source of this heterogeneity is not known. We have developed a detailed stochastic model of gene expression that takes into account scaling effects due to cell size and genome complexity. We report the results of applying this model to simulating gene expression variability in mammalian macrophages, demonstrating a possible molecular basis for heterogeneity in macrophage signalling responses. We note that the nature of predicted transcriptional noise in macrophages is different from that in yeast and bacteria. Some molecular interactions in yeast and bacteria are thought to have evolved to minimize the effects of the high-frequency noise observed in these species. Transcriptional noise in macrophages results in slow changes to gene expression levels and would not require the type of spike-filtering circuits observed in yeast and bacteria.

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Year:  2006        PMID: 16524838      PMCID: PMC1609340          DOI: 10.1098/rstb.2005.1808

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  48 in total

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  11 in total

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Review 3.  MicroRNA regulation of macrophages in human pathologies.

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Review 4.  Models at the single cell level.

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5.  Impact of gene expression noise on organismal fitness and the efficacy of natural selection.

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Review 8.  Dynamics of single-cell gene expression.

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Journal:  Mol Syst Biol       Date:  2006-11-28       Impact factor: 11.429

9.  Resolving cell population heterogeneity: real-time PCR for simultaneous multiplexed gene detection in multiple single-cell samples.

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10.  Positive selection for elevated gene expression noise in yeast.

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Journal:  Mol Syst Biol       Date:  2009-08-18       Impact factor: 11.429

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