Literature DB >> 16522084

A microfluidic device for kinetic optimization of protein crystallization and in situ structure determination.

Carl L Hansen1, Scott Classen, James M Berger, Stephen R Quake.   

Abstract

The unprecedented economies of scale and unique mass transport properties of microfluidic devices made them viable nano-volume protein crystallization screening platforms. However, realizing the full potential of microfluidic crystallization requires complementary technologies for crystal optimization and harvesting. In this paper, we report a microfluidic device which provides a link between chip-based nanoliter volume crystallization screening and structure analysis through "kinetic optimization" of crystallization reactions and in situ structure determination. Kinetic optimization through systematic variation of reactor geometry and actuation of micromechanical valves is used to screen a large ensemble of kinetic trajectories that are not practical with conventional techniques. Using this device, we demonstrate control over crystal quality, reliable scale-up from nanoliter volume reactions, facile harvesting and cryoprotectant screening, and protein structure determination at atomic resolution from data collected in-chip.

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Year:  2006        PMID: 16522084     DOI: 10.1021/ja0576637

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  42 in total

1.  Nanoliter microfluidic hybrid method for simultaneous screening and optimization validated with crystallization of membrane proteins.

Authors:  Liang Li; Debarshi Mustafi; Qiang Fu; Valentina Tereshko; Delai L Chen; Joshua D Tice; Rustem F Ismagilov
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-11       Impact factor: 11.205

2.  Phase knowledge enables rational screens for protein crystallization.

Authors:  Megan J Anderson; Carl L Hansen; Stephen R Quake
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-30       Impact factor: 11.205

Review 3.  Reactions in droplets in microfluidic channels.

Authors:  Helen Song; Delai L Chen; Rustem F Ismagilov
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-13       Impact factor: 15.336

4.  Time-controlled microfluidic seeding in nL-volume droplets to separate nucleation and growth stages of protein crystallization.

Authors:  Cory J Gerdts; Valentina Tereshko; Maneesh K Yadav; Irina Dementieva; Frank Collart; Andrzej Joachimiak; Raymond C Stevens; Peter Kuhn; Anthony Kossiakoff; Rustem F Ismagilov
Journal:  Angew Chem Int Ed Engl       Date:  2006-12-11       Impact factor: 15.336

5.  Control and measurement of the phase behavior of aqueous solutions using microfluidics.

Authors:  Jung-Uk Shim; Galder Cristobal; Darren R Link; Todd Thorsen; Yanwei Jia; Katie Piattelli; Seth Fraden
Journal:  J Am Chem Soc       Date:  2007-06-20       Impact factor: 15.419

6.  Acoustic methods for high-throughput protein crystal mounting at next-generation macromolecular crystallographic beamlines.

Authors:  Christian G Roessler; Anthony Kuczewski; Richard Stearns; Richard Ellson; Joseph Olechno; Allen M Orville; Marc Allaire; Alexei S Soares; Annie Héroux
Journal:  J Synchrotron Radiat       Date:  2013-08-08       Impact factor: 2.616

7.  Multi-step Variable Height Photolithography for Valved Multilayer Microfluidic Devices.

Authors:  Kara Brower; Adam K White; Polly M Fordyce
Journal:  J Vis Exp       Date:  2017-01-27       Impact factor: 1.355

8.  Development of high-performance X-ray transparent crystallization plates for in situ protein crystal screening and analysis.

Authors:  Ahmed S M Soliman; Matthew Warkentin; Benjamin Apker; Robert E Thorne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-06-11

9.  High-throughput analysis of single hematopoietic stem cell proliferation in microfluidic cell culture arrays.

Authors:  Véronique Lecault; Michael Vaninsberghe; Sanja Sekulovic; David J H F Knapp; Stefan Wohrer; William Bowden; Francis Viel; Thomas McLaughlin; Asefeh Jarandehei; Michelle Miller; Didier Falconnet; Adam K White; David G Kent; Michael R Copley; Fariborz Taghipour; Connie J Eaves; R Keith Humphries; James M Piret; Carl L Hansen
Journal:  Nat Methods       Date:  2011-05-22       Impact factor: 28.547

10.  Multiparameter screening on SlipChip used for nanoliter protein crystallization combining free interface diffusion and microbatch methods.

Authors:  Liang Li; Wenbin Du; Rustem F Ismagilov
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

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