Literature DB >> 16517898

Insertion sequence IS900 revisited.

Makeda Semret1, Christine Y Turenne, Marcel A Behr.   

Abstract

Many studies investigating Mycobacterium avium subsp. paratuberculosis in Crohn's disease have used molecular detection of IS900 in clinical samples, but some have described polymorphisms in IS900 as variants of this organism. Analysis of 23 M. avium subsp. paratuberculosis isolates revealed that IS900 is highly conserved, with only two sequevars distinguishing sheep and cattle lineages. Amplification of IS900-like sequences is not sufficient as a proxy for M. avium subsp. paratuberculosis.

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Year:  2006        PMID： 16517898      PMCID： PMC1393169          DOI： 10.1128/JCM.44.3.1081-1083.2006

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  19 in total

1.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment.

Authors:  Sudhir Kumar; Koichiro Tamura; Masatoshi Nei
Journal:  Brief Bioinform       Date:  2004-06       Impact factor: 11.622

2.  Detection of Mycobacterium avium subsp. paratuberculosis in intestinal and lymph node tissues of water buffaloes (Bubalus bubalis) by PCR and bacterial culture.

Authors:  P Sivakumar; B N Tripathi; Nem Singh
Journal:  Vet Microbiol       Date:  2005-07-01       Impact factor: 3.293

3.  Mycobacterium avium subsp. paratuberculosis in the catchment area and water of the River Taff in South Wales, United Kingdom, and its potential relationship to clustering of Crohn's disease cases in the city of Cardiff.

Authors:  R W Pickup; G Rhodes; S Arnott; K Sidi-Boumedine; T J Bull; A Weightman; M Hurley; J Hermon-Taylor
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

4.  Sequence and characteristics of IS900, an insertion element identified in a human Crohn's disease isolate of Mycobacterium paratuberculosis.

Authors:  E P Green; M L Tizard; M T Moss; J Thompson; D J Winterbourne; J J McFadden; J Hermon-Taylor
Journal:  Nucleic Acids Res       Date:  1989-11-25       Impact factor: 16.971

5.  An IS900-like sequence found in a Mycobacterium sp. other than Mycobacterium avium subsp. paratuberculosis.

Authors:  Stina Englund; Göran Bölske; Karl Erik Johansson
Journal:  FEMS Microbiol Lett       Date:  2002-04-09       Impact factor: 2.742

6.  High prevalence of Mycobacterium avium subspecies paratuberculosis IS900 DNA in gut tissues from individuals with Crohn's disease.

Authors:  F Autschbach; S Eisold; U Hinz; S Zinser; M Linnebacher; T Giese; T Löffler; M W Büchler; J Schmidt
Journal:  Gut       Date:  2005-07       Impact factor: 23.059

7.  IS1245 restriction fragment length polymorphism typing of Mycobacterium avium isolates: proposal for standardization.

Authors:  D van Soolingen; J Bauer; V Ritacco; S C Leão; I Pavlik; V Vincent; N Rastogi; A Gori; T Bodmer; C Garzelli; M J Garcia
Journal:  J Clin Microbiol       Date:  1998-10       Impact factor: 5.948

8.  PCR detection of Mycobacterium paratuberculosis in Crohn's disease granulomas isolated by laser capture microdissection.

Authors:  P Ryan; M W Bennett; S Aarons; G Lee; J K Collins; G C O'Sullivan; J O'Connell; F Shanahan
Journal:  Gut       Date:  2002-11       Impact factor: 23.059

9.  Detection and Isolation of Mycobacterium avium subspecies paratuberculosis from intestinal mucosal biopsies of patients with and without Crohn's disease in Sardinia.

Authors:  Leonardo A Sechi; Antonio M Scanu; Paola Molicotti; Sara Cannas; Manuela Mura; Giuseppe Dettori; Giovanni Fadda; Stefania Zanetti
Journal:  Am J Gastroenterol       Date:  2005-07       Impact factor: 10.864

10.  Culture of Mycobacterium avium subspecies paratuberculosis from the blood of patients with Crohn's disease.

Authors:  Saleh A Naser; George Ghobrial; Claudia Romero; John F Valentine
Journal:  Lancet       Date:  2004 Sep 18-24       Impact factor: 79.321
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  17 in total

1.  Mycobacterium avium subsp. paratuberculosis in lake catchments, in river water abstracted for domestic use, and in effluent from domestic sewage treatment works: diverse opportunities for environmental cycling and human exposure.

Authors:  R W Pickup; G Rhodes; T J Bull; S Arnott; K Sidi-Boumedine; M Hurley; J Hermon-Taylor
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

2.  Evaluation of in situ methods used to detect Mycobacterium avium subsp. paratuberculosis in samples from patients with Crohn's disease.

Authors:  Mangalakumari Jeyanathan; David C Alexander; Christine Y Turenne; Christiane Girard; Marcel A Behr
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

3.  Polymorphisms in gyrA and gyrB genes among Mycobacterium avium subsp. paratuberculosis type I, II, and III isolates.

Authors:  E Castellanos; A Aranaz; B Romero; L de Juan; J Alvarez; J Bezos; S Rodríguez; K Stevenson; A Mateos; L Domínguez
Journal:  J Clin Microbiol       Date:  2007-08-01       Impact factor: 5.948

4.  Mycobacterium avium subspecies paratuberculosis infection in cases of irritable bowel syndrome and comparison with Crohn's disease and Johne's disease: common neural and immune pathogenicities.

Authors:  Antonio M Scanu; Tim J Bull; Sara Cannas; Jeremy D Sanderson; Leonardo A Sechi; Giuseppe Dettori; Stefania Zanetti; John Hermon-Taylor
Journal:  J Clin Microbiol       Date:  2007-10-03       Impact factor: 5.948

5.  In the search of a cause of Crohn's disease.

Authors:  Govind K Makharia; Urvashi B Singh
Journal:  Indian J Gastroenterol       Date:  2009 Sep-Oct

6.  Genetic analysis of Mycobacterium avium complex strains used for producing purified protein derivatives.

Authors:  Makeda Semret; Douwe Bakker; Nonie Smart; Ingrid Olsen; Kaare Haslov; Marcel A Behr
Journal:  Clin Vaccine Immunol       Date:  2006-09

7.  Immunogenicity and reactivity of novel Mycobacterium avium subsp. paratuberculosis PPE MAP1152 and conserved MAP1156 proteins with sera from experimentally and naturally infected animals.

Authors:  John P Bannantine; Avery L Paulson; Ofelia Chacon; Robert J Fenton; Denise K Zinniel; David S McVey; David R Smith; Charles J Czuprynski; Raúl G Barletta
Journal:  Clin Vaccine Immunol       Date:  2010-11-17

8.  Comparison of faecal culture and IS900 PCR assay for the detection of Mycobacterium avium subsp. paratuberculosis in bovine faecal samples.

Authors:  M P Soumya; R M Pillai; P X Antony; H K Mukhopadhyay; V N Rao
Journal:  Vet Res Commun       Date:  2009-05-14       Impact factor: 2.459

9.  Development and evaluation of a novel multicopy-element-targeting triplex PCR for detection of Mycobacterium avium subsp. paratuberculosis in feces.

Authors:  Iker A Sevilla; Joseba M Garrido; Elena Molina; María V Geijo; Natalia Elguezabal; Patricia Vázquez; Ramón A Juste
Journal:  Appl Environ Microbiol       Date:  2014-04-11       Impact factor: 4.792

10.  Single nucleotide polymorphisms in the IS900 sequence of Mycobacterium avium subsp. paratuberculosis are strain type specific.

Authors:  Elena Castellanos; Alicia Aranaz; Lucia de Juan; Julio Alvarez; Sabrina Rodríguez; Beatriz Romero; Javier Bezos; Karen Stevenson; Ana Mateos; Lucas Domínguez
Journal:  J Clin Microbiol       Date:  2009-05-13       Impact factor: 5.948
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