Literature DB >> 16517650

"Candidatus Thiobios zoothamnicoli," an ectosymbiotic bacterium covering the giant marine ciliate Zoothamnium niveum.

Christian Rinke1, Stephan Schmitz-Esser, Kilian Stoecker, Andrea D Nussbaumer, Dávid A Molnár, Katrina Vanura, Michael Wagner, Matthias Horn, Jörg A Ott, Monika Bright.   

Abstract

Zoothamnium niveum is a giant, colonial marine ciliate from sulfide-rich habitats obligatorily covered with chemoautotrophic, sulfide-oxidizing bacteria which appear as coccoid rods and rods with a series of intermediate shapes. Comparative 16S rRNA gene sequence analysis and fluorescence in situ hybridization showed that the ectosymbiont of Z. niveum belongs to only one pleomorphic phylotype. The Z. niveum ectosymbiont is only moderately related to previously identified groups of thiotrophic symbionts within the Gammaproteobacteria, and shows highest 16S rRNA sequence similarity with the free-living sulfur-oxidizing bacterial strain ODIII6 from shallow-water hydrothermal vents of the Mediterranean Sea (94.5%) and an endosymbiont from a deep-sea hydrothermal vent gastropod of the Indian Ocean Ridge (93.1%). A replacement of this specific ectosymbiont by a variety of other bacteria was observed only for senescent basal parts of the host colonies. The taxonomic status "Candidatus Thiobios zoothamnicoli" is proposed for the ectosymbiont of Z. niveum based on its ultrastructure, its 16S rRNA gene, the intergenic spacer region, and its partial 23S rRNA gene sequence.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16517650      PMCID: PMC1393213          DOI: 10.1128/AEM.72.3.2014-2021.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  26 in total

1.  Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; T Brinkhoff; G Muyzer; W Ziebis; J Kuever
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

2.  The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

Authors:  H Daims; A Brühl; R Amann; K H Schleifer; M Wagner
Journal:  Syst Appl Microbiol       Date:  1999-09       Impact factor: 4.022

3.  probeBase: an online resource for rRNA-targeted oligonucleotide probes.

Authors:  Alexander Loy; Matthias Horn; Michael Wagner
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

Review 4.  Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes.

Authors:  Michael Wagner; Matthias Horn; Holger Daims
Journal:  Curr Opin Microbiol       Date:  2003-06       Impact factor: 7.934

Review 5.  Phylogenetic identification and in situ detection of individual microbial cells without cultivation.

Authors:  R I Amann; W Ludwig; K H Schleifer
Journal:  Microbiol Rev       Date:  1995-03

6.  The oligonucleotide probe database.

Authors:  E W Alm; D B Oerther; N Larsen; D A Stahl; L Raskin
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

7.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

8.  Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov.

Authors:  R Howarth; R F Unz; E M Seviour; R J Seviour; L L Blackall; R W Pickup; J G Jones; J Yaguchi; I M Head
Journal:  Int J Syst Bacteriol       Date:  1999-10

9.  Phylogenetic analysis of a highly specific association between ectosymbiotic, sulfur-oxidizing bacteria and a marine nematode.

Authors:  M F Polz; D L Distel; B Zarda; R Amann; H Felbeck; J A Ott; C M Cavanaugh
Journal:  Appl Environ Microbiol       Date:  1994-12       Impact factor: 4.792

10.  The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis.

Authors:  J R Cole; B Chai; R J Farris; Q Wang; S A Kulam; D M McGarrell; G M Garrity; J M Tiedje
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

View more
  25 in total

1.  Characterization of the population of the sulfur-oxidizing symbiont of Codakia orbicularis (Bivalvia, Lucinidae) by single-cell analyses.

Authors:  Audrey Caro; Olivier Gros; Patrice Got; Rutger De Wit; Marc Troussellier
Journal:  Appl Environ Microbiol       Date:  2007-01-26       Impact factor: 4.792

2.  Response of estuarine biofilm microbial community development to changes in dissolved oxygen and nutrient concentrations.

Authors:  Andreas Nocker; Joe Eugene Lepo; Linda Lin Martin; Richard Allan Snyder
Journal:  Microb Ecol       Date:  2007-03-10       Impact factor: 4.552

3.  "Candidatus Defluviella procrastinata" and "Candidatus Cyrtobacter zanobii", two novel ciliate endosymbionts belonging to the "Midichloria clade".

Authors:  Vittorio Boscaro; Giulio Petroni; Alessandro Ristori; Franco Verni; Claudia Vannini
Journal:  Microb Ecol       Date:  2013-01-08       Impact factor: 4.552

4.  A House for Two--Double Bacterial Infection in Euplotes woodruffi Sq1 (Ciliophora, Euplotia) Sampled in Southeastern Brazil.

Authors:  Marcus V X Senra; Roberto J P Dias; Michele Castelli; Inácio D Silva-Neto; Franco Verni; Carlos A G Soares; Giulio Petroni
Journal:  Microb Ecol       Date:  2015-09-17       Impact factor: 4.552

5.  Extracellular and mixotrophic symbiosis in the whale-fall mussel Adipicola pacifica: a trend in evolution from extra- to intracellular symbiosis.

Authors:  Yoshihiro Fujiwara; Masaru Kawato; Chikayo Noda; Gin Kinoshita; Toshiro Yamanaka; Yuko Fujita; Katsuyuki Uematsu; Jun-Ichi Miyazaki
Journal:  PLoS One       Date:  2010-07-27       Impact factor: 3.240

Review 6.  Cellular differentiation and individuality in the 'minor' multicellular taxa.

Authors:  Matthew D Herron; Armin Rashidi; Deborah E Shelton; William W Driscoll
Journal:  Biol Rev Camb Philos Soc       Date:  2013-03-01

7.  Revised systematics of Holospora-like bacteria and characterization of "Candidatus Gortzia infectiva", a novel macronuclear symbiont of Paramecium jenningsi.

Authors:  Vittorio Boscaro; Sergei I Fokin; Martina Schrallhammer; Michael Schweikert; Giulio Petroni
Journal:  Microb Ecol       Date:  2012-09-01       Impact factor: 4.552

8.  Act together-implications of symbioses in aquatic ciliates.

Authors:  Claudia Dziallas; Martin Allgaier; Michael T Monaghan; Hans-Peter Grossart
Journal:  Front Microbiol       Date:  2012-08-07       Impact factor: 5.640

9.  Molecular characterization of the symbionts associated with marine nematodes of the genus Robbea.

Authors:  Christoph Bayer; Niels R Heindl; Christian Rinke; Sebastian Lücker; Joerg A Ott; Silvia Bulgheresi
Journal:  Environ Microbiol Rep       Date:  2009-04       Impact factor: 3.541

10.  Ubiquitous Gammaproteobacteria dominate dark carbon fixation in coastal sediments.

Authors:  Stefan Dyksma; Kerstin Bischof; Bernhard M Fuchs; Katy Hoffmann; Dimitri Meier; Anke Meyerdierks; Petra Pjevac; David Probandt; Michael Richter; Ramunas Stepanauskas; Marc Mußmann
Journal:  ISME J       Date:  2016-02-12       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.