Literature DB >> 10555365

Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov.

R Howarth1, R F Unz, E M Seviour, R J Seviour, L L Blackall, R W Pickup, J G Jones, J Yaguchi, I M Head.   

Abstract

The relationship of mixotrophic and autotrophic Thiothrix species to morphologically similar chemoorganotrophic bacteria (e.g. Leucothrix species, Eikelboom type 021N bacteria) has been a matter of debate for some years. These bacteria have alternatively been grouped together on the basis of shared morphological features or separated on the basis of their nutrition. Many of these bacteria are difficult to maintain in axenic culture and, until recently, few isolates were available to allow comprehensive phenotypic and genotypic characterization. Several isolates of Thiothrix spp. and Eikelboom type 021N strains were characterized by comparative 16S rRNA sequence analysis. This revealed that the Thiothrix spp. and Eikelboom type 021N isolates formed a monophyletic group. Furthermore, isolates of Eikelboom type 021N bacteria isolated independently from different continents were phylogenetically closely related. The 16S rRNA sequence-based phylogeny was congruent with the morphological similarities between Thiothrix and Eikelboom type 021N. However, one isolate examined in this study (Ben47) shared many morphological features with the Thiothrix spp. and Eikelboom type 021N isolates, but was not closely related to them phylogenetically. Consequently, morphology alone cannot be used to assign bacteria to the Thiothrix/type 021N group. Comparative 16S rRNA sequence analysis supports monophyly of the Thiothrix/type 021N group, and phenotypic differences between the Thiothrix spp. and Eikelboom type 021N bacteria are currently poorly defined. For example, both groups include heterotrophic organisms that deposit intracellular elemental sulfur. It is therefore proposed that the Eikelboom type 021N bacteria should be accommodated within the genus Thiothrix as a new species, Thiothrix eikelboomii sp. nov., and three further new Thiothrix species are described: Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov.

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Year:  1999        PMID: 10555365     DOI: 10.1099/00207713-49-4-1817

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  16 in total

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Journal:  Appl Environ Microbiol       Date:  2002-01       Impact factor: 4.792

2.  Kinetics of perchlorate- and chlorate-respiring bacteria.

Authors:  B E Logan; H Zhang; P Mulvaney; M G Milner; I M Head; R F Unz
Journal:  Appl Environ Microbiol       Date:  2001-06       Impact factor: 4.792

3.  Novel epibiotic thiothrix bacterium on a marine amphipod.

Authors:  David C Gillan; Nicole Dubilier
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

4.  Dominance of epiphytic filamentous Thiothrix spp. on an aquatic macrophyte in a hydrothermal vent flume in Sedge Bay, Yellowstone Lake, Wyoming.

Authors:  Nick R Konkol; James C Bruckner; Carmen Aguilar; David Lovalvo; James S Maki
Journal:  Microb Ecol       Date:  2010-04-13       Impact factor: 4.552

5.  Novel, attached, sulfur-oxidizing bacteria at shallow hydrothermal vents possess vacuoles not involved in respiratory nitrate accumulation.

Authors:  Karen M Kalanetra; Sherry L Huston; Douglas C Nelson
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

6.  Natural communities of novel archaea and bacteria with a string-of-pearls-like morphology: molecular analysis of the bacterial partners.

Authors:  Christine Moissl; Christian Rudolph; Robert Huber
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

7.  Dynamics of microbial community structure of and enhanced biological phosphorus removal by aerobic granules cultivated on propionate or acetate.

Authors:  Graciela Gonzalez-Gil; Christof Holliger
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

8.  Phylogenetic analysis of and oligonucleotide probe development for eikelboom type 021N filamentous bacteria isolated from bulking activated sludge.

Authors:  T Kanagawa; Y Kamagata; S Aruga; T Kohno; M Horn; M Wagner
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

9.  Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata by using functional metagenomics.

Authors:  María Alcaide; Anatoli Tchigvintsev; Mónica Martínez-Martínez; Ana Popovic; Oleg N Reva; Álvaro Lafraya; Rafael Bargiela; Taras Y Nechitaylo; Ruth Matesanz; Marie-Anne Cambon-Bonavita; Mohamed Jebbar; Michail M Yakimov; Alexei Savchenko; Olga V Golyshina; Alexander F Yakunin; Peter N Golyshin; Manuel Ferrer
Journal:  Appl Environ Microbiol       Date:  2015-01-16       Impact factor: 4.792

10.  "Candidatus Thiobios zoothamnicoli," an ectosymbiotic bacterium covering the giant marine ciliate Zoothamnium niveum.

Authors:  Christian Rinke; Stephan Schmitz-Esser; Kilian Stoecker; Andrea D Nussbaumer; Dávid A Molnár; Katrina Vanura; Michael Wagner; Matthias Horn; Jörg A Ott; Monika Bright
Journal:  Appl Environ Microbiol       Date:  2006-03       Impact factor: 4.792

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