Literature DB >> 16511304

Crystallization and preliminary X-ray analysis of cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens.

K M Boyko1, K M Polyakov, T V Tikhonova, A Slutsky, A N Antipov, R A Zvyagilskaya, G P Bourenkov, A N Popov, V S Lamzin, V O Popov.   

Abstract

A novel cytochrome c nitrite reductase (TvNiR) was isolated from the haloalkalophilic bacterium Thioalkalivibrio nitratireducens. The enzyme catalyses nitrite and hydroxylamine reduction, with ammonia as the only product of both reactions. It consists of 525 amino-acid residues and contains eight haems c. TvNiR crystals were grown by the hanging-drop vapour-diffusion technique. The crystals display cubic symmetry and belong to space group P2(1)3, with unit-cell parameter a = 194 A. A native data set was obtained to 1.5 A resolution. The structure was solved by the SAD technique using the data collected at the Fe absorption peak wavelength.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16511304      PMCID: PMC2197178          DOI: 10.1107/S174430910600296X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

1.  Structure of cytochrome c nitrite reductase.

Authors:  O Einsle; A Messerschmidt; P Stach; G P Bourenkov; H D Bartunik; R Huber; P M Kroneck
Journal:  Nature       Date:  1999-07-29       Impact factor: 49.962

2.  Automated protein model building combined with iterative structure refinement.

Authors:  A Perrakis; R Morris; V S Lamzin
Journal:  Nat Struct Biol       Date:  1999-05

Review 3.  Inorganic nitrogen metabolism in bacteria.

Authors:  D J Richardson; N J Watmough
Journal:  Curr Opin Chem Biol       Date:  1999-04       Impact factor: 8.822

4.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

5.  Cytochrome c nitrite reductase from Wolinella succinogenes. Structure at 1.6 A resolution, inhibitor binding, and heme-packing motifs.

Authors:  O Einsle; P Stach; A Messerschmidt; J Simon; A Kröger; R Huber; P M Kroneck
Journal:  J Biol Chem       Date:  2000-12-15       Impact factor: 5.157

6.  Structure and spectroscopy of the periplasmic cytochrome c nitrite reductase from Escherichia coli.

Authors:  Vicki A Bamford; Hayley C Angove; Harriet E Seward; Andrew J Thomson; Jeffrey A Cole; Julea N Butt; Andrew M Hemmings; David J Richardson
Journal:  Biochemistry       Date:  2002-03-05       Impact factor: 3.162

7.  Cytochrome c nitrite reductase from Desulfovibrio desulfuricans ATCC 27774. The relevance of the two calcium sites in the structure of the catalytic subunit (NrfA).

Authors:  Carlos A Cunha; Sofia Macieira; João M Dias; Gabriela Almeida; Luisa L Goncalves; Cristina Costa; Jorge Lampreia; Robert Huber; José J G Moura; Isabel Moura; Maria João Romão
Journal:  J Biol Chem       Date:  2003-03-04       Impact factor: 5.157

Review 8.  Enzymology and bioenergetics of respiratory nitrite ammonification.

Authors:  Jörg Simon
Journal:  FEMS Microbiol Rev       Date:  2002-08       Impact factor: 16.408

9.  Thialkalivibrio nitratireducens sp. nov., a nitrate-reducing member of an autotrophic denitrifying consortium from a soda lake.

Authors:  Dimitry Yu Sorokin; Tat'yana P Tourova; Klaas A Sjollema; J Gijs Kuenen
Journal:  Int J Syst Evol Microbiol       Date:  2003-11       Impact factor: 2.747

10.  Complete denitrification in coculture of obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria from a hypersaline soda lake.

Authors:  Dimitry Y Sorokin; Alexey N Antipov; J Gijs Kuenen
Journal:  Arch Microbiol       Date:  2003-06-24       Impact factor: 2.552

View more
  1 in total

Review 1.  Multi-heme proteins: nature's electronic multi-purpose tool.

Authors:  Kathryn D Bewley; Katie E Ellis; Mackenzie A Firer-Sherwood; Sean J Elliott
Journal:  Biochim Biophys Acta       Date:  2013-04-02
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.