Literature DB >> 10440380

Structure of cytochrome c nitrite reductase.

O Einsle1, A Messerschmidt, P Stach, G P Bourenkov, H D Bartunik, R Huber, P M Kroneck.   

Abstract

The enzyme cytochrome c nitrite reductase catalyses the six-electron reduction of nitrite to ammonia as one of the key steps in the biological nitrogen cycle, where it participates in the anaerobic energy metabolism of dissimilatory nitrate ammonification. Here we report on the crystal structure of this enzyme from the microorganism Sulfurospirillum deleyianum, which we solved by multiwavelength anomalous dispersion methods. We propose a reaction scheme for the transformation of nitrite based on structural and spectroscopic information. Cytochrome c nitrite reductase is a functional dimer, with 10 close-packed haem groups of type c and an unusual lysine-coordinated high-spin haem at the active site. By comparing the haem arrangement of this nitrite reductase with that of other multihaem cytochromes, we have been able to identify a family of proteins in which the orientation of haem groups is conserved whereas structure and function are not.

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Year:  1999        PMID: 10440380     DOI: 10.1038/22802

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  69 in total

Review 1.  C-type cytochromes: diverse structures and biogenesis systems pose evolutionary problems.

Authors:  James W A Allen; Oliver Daltrop; Julie M Stevens; Stuart J Ferguson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

2.  Microbial community composition across a coastal hydrological system affected by submarine groundwater discharge (SGD).

Authors:  Dini Adyasari; Christiane Hassenrück; Daniel Montiel; Natasha Dimova
Journal:  PLoS One       Date:  2020-06-29       Impact factor: 3.240

3.  In vitro formation of a c-type cytochrome.

Authors:  Oliver Daltrop; James W A Allen; Anthony C Willis; Stuart J Ferguson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

4.  A robust genetic system for producing heterodimeric native and mutant cytochrome bc(1).

Authors:  Bahia Khalfaoui-Hassani; Pascal Lanciano; Fevzi Daldal
Journal:  Biochemistry       Date:  2013-10-01       Impact factor: 3.162

5.  The H93G Myoglobin Cavity Mutant as a Versatile Scaffold for Modeling Heme Iron Coordination Structures in Protein Active Sites and Their Characterization with Magnetic Circular Dichroism Spectroscopy.

Authors:  Jing Du; Masanori Sono; John H Dawson
Journal:  Coord Chem Rev       Date:  2011-04-01       Impact factor: 22.315

6.  Structure and sequence conservation of hao cluster genes of autotrophic ammonia-oxidizing bacteria: evidence for their evolutionary history.

Authors:  David J Bergmann; Alan B Hooper; Martin G Klotz
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

7.  X-ray structure of the membrane-bound cytochrome c quinol dehydrogenase NrfH reveals novel haem coordination.

Authors:  Maria Luisa Rodrigues; Tânia F Oliveira; Inês A C Pereira; Margarida Archer
Journal:  EMBO J       Date:  2006-11-30       Impact factor: 11.598

8.  Crystallization and preliminary structure determination of the membrane-bound complex cytochrome c nitrite reductase from Desulfovibrio vulgaris Hildenborough.

Authors:  M L Rodrigues; T Oliveira; P M Matias; I C Martins; F M A Valente; I A C Pereira; M Archer
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-31

Review 9.  The microbial nitrogen-cycling network.

Authors:  Marcel M M Kuypers; Hannah K Marchant; Boran Kartal
Journal:  Nat Rev Microbiol       Date:  2018-02-05       Impact factor: 60.633

10.  Influence of heme c attachment on heme conformation and potential.

Authors:  Jesse G Kleingardner; Benjamin D Levin; Giorgio Zoppellaro; K Kristoffer Andersson; Sean J Elliott; Kara L Bren
Journal:  J Biol Inorg Chem       Date:  2018-08-24       Impact factor: 3.358

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