Literature DB >> 16511289

In-house SIRAS phasing of the polyunsaturated fatty-acid isomerase from Propionibacterium acnes.

Alena Liavonchanka1, Ellen Hornung, Ivo Feussner, Markus Rudolph.   

Abstract

The polyenoic fatty-acid isomerase from Propionibacterium acnes (PAI) catalyzes the double-bond isomerization of linoleic acid to conjugated linoleic acid, which is a dairy- or meat-derived fatty acid in the human diet. PAI was overproduced in Escherichia coli and purified to homogeneity as a yellow-coloured protein. The nature of the bound cofactor was analyzed by absorption and fluorescence spectroscopy. Single crystals of PAI were obtained in two crystal forms. Cubic shaped crystals belong to space group I2(1)3, with a unit-cell parameter of 160.4 A, and plate-like crystals belong to the monoclinic space group C2, with unit-cell parameters a = 133.7, b = 60.8, c = 72.2 A, beta = 115.8 degrees. Both crystal forms contain one molecule per asymmetric unit and diffract to a resolution of better than 2.0 A. Initial phases were obtained by SIRAS from in-house data from a cubic crystal that was soaked with an unusually low KI concentration of 0.25 M.

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Year:  2006        PMID: 16511289      PMCID: PMC2150964          DOI: 10.1107/S1744309106001229

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  11 in total

1.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

2.  Anomalous signal indicators in protein crystallography.

Authors:  P H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-10-19

3.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  Biohydrogenation of unsaturated fatty acids. IV. Substrate specificity and inhibition of linoleate delta-12-cis, delta-11-trans-isomerase from Butyrivibrio fibrisolvens.

Authors:  C R Kepler; W P Tucker; S B Tove
Journal:  J Biol Chem       Date:  1970-07-25       Impact factor: 5.157

5.  Regulation of stearoyl-CoA desaturase activity by the trans-10,cis-12 isomer of conjugated linoleic acid in HepG2 cells.

Authors:  Y Choi; Y Park; M W Pariza; J M Ntambi
Journal:  Biochem Biophys Res Commun       Date:  2001-06-15       Impact factor: 3.575

6.  UDP-galactopyranose mutase has a novel structure and mechanism.

Authors:  D A Sanders; A G Staines; S A McMahon; M R McNeil; C Whitfield; J H Naismith
Journal:  Nat Struct Biol       Date:  2001-10

7.  Novel approach to phasing proteins: derivatization by short cryo-soaking with halides.

Authors:  Z Dauter; M Dauter; K R Rajashankar
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-02

Review 8.  Conjugated linoleic acids: are they beneficial or detrimental to health?

Authors:  Klaus W J Wahle; Steven D Heys; Dino Rotondo
Journal:  Prog Lipid Res       Date:  2004-11       Impact factor: 16.195

9.  Locating the anomalous scatterer substructures in halide and sulfur phasing.

Authors:  Isabel Usón; Bernhard Schmidt; Rixa von Bülow; Susanne Grimme; Kurt von Figura; Miroslawa Dauter; Kanagalaghatta R Rajashankar; Zbigniew Dauter; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-12-19

10.  Polyenoic fatty acid isomerase from the marine alga Ptilota filicina: protein characterization and functional expression of the cloned cDNA.

Authors:  Wei Zheng; Mitchell L Wise; Annette Wyrick; James G Metz; Ling Yuan; William H Gerwick
Journal:  Arch Biochem Biophys       Date:  2002-05-01       Impact factor: 4.013

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  3 in total

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Authors:  Sibel Irmak; Nurhan Turgut Dunford; Stanley E Gilliland; Veneta Banskalieva; Michael Eisenmenger
Journal:  Lipids       Date:  2006-08       Impact factor: 1.880

2.  On the mechanism of a polyunsaturated fatty acid double bond isomerase from Propionibacterium acnes.

Authors:  Alena Liavonchanka; Markus G Rudolph; Kai Tittmann; Mats Hamberg; Ivo Feussner
Journal:  J Biol Chem       Date:  2009-01-21       Impact factor: 5.157

3.  Identification and characterization of an oleate hydratase-encoding gene from Bifidobacterium breve.

Authors:  Kerry Joan O'Connell; Mary O'Connell Motherway; Alan A Hennessey; Florian Brodhun; R Paul Ross; Ivo Feussner; Catherine Stanton; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  Bioengineered       Date:  2013-08-29       Impact factor: 3.269

  3 in total

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