Literature DB >> 16511102

Oligonucleotides with cyclohexene-nucleoside building blocks: crystallization and preliminary X-ray studies of a left-handed sequence GTGTACAC.

Koen Robeyns1, Piet Herdewijn, Luc Van Meervelt.   

Abstract

Cyclohexene nucleic acids contain a cyclohexene ring instead of the normal beta-D-2'-deoxyribose. The cyclohexene oligonucleotide GTGTACAC was synthesized using phosphoramidite chemistry and standard protecting groups. Crystals of GTGTACAC were obtained at 289 K by the hanging-drop vapour-diffusion technique. The crystals diffract to 1.7 A resolution and belong to the trigonal space group R3, with unit-cell parameters a = 41.434, c = 66.735 A.

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Year:  2005        PMID: 16511102      PMCID: PMC1952319          DOI: 10.1107/S1744309105015228

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  4 in total

1.  A highly efficient 24-condition matrix for the crystallization of nucleic acid fragments.

Authors:  I Berger; C H Kang; N Sinha; M Wolters; A Rich
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1996-05-01

2.  RNase H mediated cleavage of RNA by cyclohexene nucleic acid (CeNA).

Authors:  B Verbeure; E Lescrinier; J Wang; P Herdewijn
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

3.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  Base pairing properties of D- and L-cyclohexene nucleic acids (CeNA).

Authors:  Ping Gu; Guy Schepers; Jef Rozenski; Arthur Van Aerschot; Piet Herdewijn
Journal:  Oligonucleotides       Date:  2003
  4 in total

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