Literature DB >> 16511031

Crystallization and preliminary X-ray diffraction analysis of thioredoxin peroxidase from the aerobic hyperthermophilic archaeon Aeropyrum pernix K1.

Tsutomu Nakamura1, Hiroyoshi Matsumura, Tsuyoshi Inoue, Yasushi Kai, Koichi Uegaki, Yoshihisa Hagihara, Mitsuo Ataka, Kazuhiko Ishikawa.   

Abstract

Thioredoxin peroxidase is a member of the peroxiredoxin family and plays a dominant role in a hydrogen peroxide metabolism. A recombinant form of the hyperthermostable thioredoxin peroxidase from the aerobic hyperthermophilic archaeon Aeropyrum pernix K1, a polypeptide consisting of 250 amino acids, was purified. The C207S mutant protein was crystallized by the hanging-drop vapour-diffusion method using potassium sodium tartrate as the precipitant at 298 K. Diffraction data were collected and processed to 2.7 A resolution. The crystal belongs to space group P1, with unit-cell parameters a = 126.2, b = 126.3, c = 213.7 A, alpha = 80.4, beta = 80.3, gamma = 70.7 degrees. Calculation of the self-rotation function showed that the protein quaternary structure includes a fivefold axis and five twofold axes.

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Year:  2005        PMID: 16511031      PMCID: PMC1952277          DOI: 10.1107/S1744309105005294

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

Review 1.  Peroxiredoxin, a novel family of peroxidases.

Authors:  S G Rhee; S W Kang; T S Chang; W Jeong; K Kim
Journal:  IUBMB Life       Date:  2001-07       Impact factor: 3.885

2.  Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling.

Authors:  Zachary A Wood; Leslie B Poole; P Andrew Karplus
Journal:  Science       Date:  2003-04-25       Impact factor: 47.728

3.  Identification and characterization of thioredoxin and thioredoxin reductase from Aeropyrum pernix K1.

Authors:  Sung-Jong Jeon; Kazuhiko Ishikawa
Journal:  Eur J Biochem       Date:  2002-11

4.  Crystal structure of decameric 2-Cys peroxiredoxin from human erythrocytes at 1.7 A resolution.

Authors:  E Schröder; J A Littlechild; A A Lebedev; N Errington; A A Vagin; M N Isupov
Journal:  Structure       Date:  2000-06-15       Impact factor: 5.006

5.  Crystal structure of a multifunctional 2-Cys peroxiredoxin heme-binding protein 23 kDa/proliferation-associated gene product.

Authors:  S Hirotsu; Y Abe; K Okada; N Nagahara; H Hori; T Nishino; T Hakoshima
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

6.  Characterization of novel hexadecameric thioredoxin peroxidase from Aeropyrum pernix K1.

Authors:  Sung-Jong Jeon; Kazuhiko Ishikawa
Journal:  J Biol Chem       Date:  2003-04-21       Impact factor: 5.157

7.  The structure of reduced tryparedoxin peroxidase reveals a decamer and insight into reactivity of 2Cys-peroxiredoxins.

Authors:  M S Alphey; C S Bond; E Tetaud; A H Fairlamb; W N Hunter
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

8.  Crystal structure of human peroxiredoxin 5, a novel type of mammalian peroxiredoxin at 1.5 A resolution.

Authors:  J P Declercq; C Evrard; A Clippe; D V Stricht; A Bernard; B Knoops
Journal:  J Mol Biol       Date:  2001-08-24       Impact factor: 5.469

9.  Dimers to doughnuts: redox-sensitive oligomerization of 2-cysteine peroxiredoxins.

Authors:  Zachary A Wood; Leslie B Poole; Roy R Hantgan; P Andrew Karplus
Journal:  Biochemistry       Date:  2002-04-30       Impact factor: 3.162

Review 10.  Structure, mechanism and regulation of peroxiredoxins.

Authors:  Zachary A Wood; Ewald Schröder; J Robin Harris; Leslie B Poole
Journal:  Trends Biochem Sci       Date:  2003-01       Impact factor: 13.807

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  3 in total

1.  Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.

Authors:  Tomoki Himiyama; Tsutomu Nakamura
Journal:  Protein Sci       Date:  2020-02-12       Impact factor: 6.725

2.  Structure of peroxiredoxin from the anaerobic hyperthermophilic archaeon Pyrococcus horikoshii.

Authors:  Tsutomu Nakamura; Aika Mori; Mayumi Niiyama; Hiroyoshi Matsumura; Chisa Tokuyama; Junji Morita; Koichi Uegaki; Tsuyoshi Inoue
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-06-27

3.  Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate.

Authors:  Tsutomu Nakamura; Takahiko Yamamoto; Manabu Abe; Hiroyoshi Matsumura; Yoshihisa Hagihara; Tadashi Goto; Takafumi Yamaguchi; Tsuyoshi Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-24       Impact factor: 11.205

  3 in total

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