Literature DB >> 10891277

The structure of reduced tryparedoxin peroxidase reveals a decamer and insight into reactivity of 2Cys-peroxiredoxins.

M S Alphey1, C S Bond, E Tetaud, A H Fairlamb, W N Hunter.   

Abstract

Tryparedoxin peroxidase (TryP) is a recently discovered 2Cys-peroxiredoxin involved in defence against oxidative stress in parasitic trypanosomatids. The crystal structure of recombinant Crithidia fasciculata TryP, in the reduced state, has been determined using multi-wavelength anomalous dispersion methods applied to a selenomethionyl derivative. The model comprises a decamer with 52 symmetry, ten chloride ions with 23 water molecules and has been refined, using data to 3.2 A resolution (1 A=0.1 nm), to an R-factor and R(free) of 27.3 and 28.6 %, respectively. Secondary structure topology places TryP along with tryparedoxin and glutathione peroxidase in a distinct subgroup of the thioredoxin super-family. The molecular details at the active site support ideas about the enzyme mechanism and comparisons with an oxidised 2Cys-peroxiredoxin reveal structural alterations induced by the change in oxidation state. These include a difference in quaternary structure from dimer (oxidised form) to decamer (reduced form). The 2Cys-peroxiredoxin assembly may prevent indiscriminate oligomerisation, localise ten peroxidase active sites and contribute to both the specificity of reduction by the redox partner tryparedoxin and attraction of peroxides into the active site. Copyright 2000 Academic Press.

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Year:  2000        PMID: 10891277     DOI: 10.1006/jmbi.2000.3881

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  35 in total

1.  Essential thioredoxin-dependent peroxiredoxin system from Helicobacter pylori: genetic and kinetic characterization.

Authors:  L M Baker; A Raudonikiene; P S Hoffman; L B Poole
Journal:  J Bacteriol       Date:  2001-03       Impact factor: 3.490

Review 2.  Metabolic pathway analysis in trypanosomes and malaria parasites.

Authors:  Alan H Fairlamb
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-01-29       Impact factor: 6.237

3.  Structural and electrostatic asymmetry at the active site in typical and atypical peroxiredoxin dimers.

Authors:  Freddie R Salsbury; Ye Yuan; Michael H Knaggs; Leslie B Poole; Jacquelyn S Fetrow
Journal:  J Phys Chem B       Date:  2012-04-04       Impact factor: 2.991

4.  Enhancing MAD F(A) data for substructure determination.

Authors:  Hongliang Xu
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-07-14

5.  Molecular cloning and characterization of peroxiredoxin from Toxoplasma gondii.

Authors:  E S Son; K J Song; J C Shin; H W Nam
Journal:  Korean J Parasitol       Date:  2001-06       Impact factor: 1.341

6.  Structural and biochemical characterization of peroxiredoxin Qbeta from Xylella fastidiosa: catalytic mechanism and high reactivity.

Authors:  Bruno Brasil Horta; Marcos Antonio de Oliveira; Karen Fulan Discola; José Renato Rosa Cussiol; Luis Eduardo Soares Netto
Journal:  J Biol Chem       Date:  2010-03-24       Impact factor: 5.157

7.  Cloning, overexpression, purification and preliminary crystallographic studies of a mitochondrial type II peroxiredoxin from Pisum sativum.

Authors:  Sergio Barranco-Medina; Francisco Javier López-Jaramillo; Laura Bernier-Villamor; Francisca Sevilla; Juan José Lázaro
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-06-26

8.  Crystallization and preliminary X-ray diffraction analysis of thioredoxin peroxidase from the aerobic hyperthermophilic archaeon Aeropyrum pernix K1.

Authors:  Tsutomu Nakamura; Hiroyoshi Matsumura; Tsuyoshi Inoue; Yasushi Kai; Koichi Uegaki; Yoshihisa Hagihara; Mitsuo Ataka; Kazuhiko Ishikawa
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-02-24

9.  Conformational and oligomeric effects on the cysteine pK(a) of tryparedoxin peroxidase.

Authors:  Ye Yuan; Michael H Knaggs; Leslie B Poole; Jacquelyn S Fetrow; Freddie R Salsbury
Journal:  J Biomol Struct Dyn       Date:  2010-08

10.  H2O2-dependent hyperoxidation of peroxiredoxin 6 (Prdx6) plays a role in cellular toxicity via up-regulation of iPLA2 activity.

Authors:  So Yong Kim; Hee-Yeon Jo; Mi Hye Kim; Yun-yi Cha; Sung Won Choi; Jae-Hyuck Shim; Tae Jin Kim; Ki-Young Lee
Journal:  J Biol Chem       Date:  2008-09-30       Impact factor: 5.157

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