Literature DB >> 16511011

Two crystal structures of dihydrofolate reductase-thymidylate synthase from Cryptosporidium hominis reveal protein-ligand interactions including a structural basis for observed antifolate resistance.

Amy C Anderson1.   

Abstract

Cryptosporidium hominis is a protozoan parasite that causes acute gastrointestinal illness. There are no effective therapies for cryptosporidiosis, highlighting the need for new drug-lead discovery. An analysis of the protein-ligand interactions in two crystal structures of dihydrofolate reductase-thymidylate synthase (DHFR-TS) from C. hominis, determined at 2.8 and 2.87 A resolution, reveals that the interactions of residues Ile29, Thr58 and Cys113 in the active site of C. hominis DHFR provide a possible structural basis for the observed antifolate resistance. A comparison with the structure of human DHFR reveals active-site differences that may be exploited for the design of species-selective inhibitors.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16511011      PMCID: PMC1952288          DOI: 10.1107/S1744309105002435

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  19 in total

1.  A subgroup algorithm to identify cross-rotation peaks consistent with non-crystallographic symmetry.

Authors:  Ryan H Lilien; Chris Bailey-Kellogg; Amy C Anderson; Bruce R Donald
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-05-21

2.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

Review 3.  Cryptosporidiosis: laboratory investigations and chemotherapy.

Authors:  S Tzipori
Journal:  Adv Parasitol       Date:  1998       Impact factor: 3.870

4.  Efficacy of 101 antimicrobials and other agents on the development of Cryptosporidium parvum in vitro.

Authors:  K M Woods; M V Nesterenko; S J Upton
Journal:  Ann Trop Med Parasitol       Date:  1996-12

5.  Plasmodium falciparum: molecular characterization of multidrug-resistant Cambodian isolates.

Authors:  L K Basco; P E de Pecoulas; J Le Bras; C M Wilson
Journal:  Exp Parasitol       Date:  1996-03       Impact factor: 2.011

6.  2,4-Diamino-5-benzylpyrimidines as antibacterial agents. 7. Analysis of the effect of 3,5-dialkyl substituent size and shape on binding to four different dihydrofolate reductase enzymes.

Authors:  B Roth; B S Rauckman; R Ferone; D P Baccanari; J N Champness; R M Hyde
Journal:  J Med Chem       Date:  1987-02       Impact factor: 7.446

7.  Receptor-based design of dihydrofolate reductase inhibitors: comparison of crystallographically determined enzyme binding with enzyme affinity in a series of carboxy-substituted trimethoprim analogues.

Authors:  L F Kuyper; B Roth; D P Baccanari; R Ferone; C R Beddell; J N Champness; D K Stammers; J G Dann; F E Norrington; D J Baker
Journal:  J Med Chem       Date:  1985-03       Impact factor: 7.446

8.  Phylogenetic classification of protozoa based on the structure of the linker domain in the bifunctional enzyme, dihydrofolate reductase-thymidylate synthase.

Authors:  Robert H O'Neil; Ryan H Lilien; Bruce R Donald; Robert M Stroud; Amy C Anderson
Journal:  J Biol Chem       Date:  2003-10-09       Impact factor: 5.157

Review 9.  Cryptosporidiosis: an emerging, highly infectious threat.

Authors:  R L Guerrant
Journal:  Emerg Infect Dis       Date:  1997 Jan-Mar       Impact factor: 6.883

10.  Potential antifolate resistance determinants and genotypic variation in the bifunctional dihydrofolate reductase-thymidylate synthase gene from human and bovine isolates of Cryptosporidium parvum.

Authors:  J R Vásquez; L Goozé; K Kim; J Gut; C Petersen; R G Nelson
Journal:  Mol Biochem Parasitol       Date:  1996-08       Impact factor: 1.759

View more
  13 in total

Review 1.  Three-dimensional structures in the design of therapeutics targeting parasitic protozoa: reflections on the past, present and future.

Authors:  Wim G J Hol
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-04-16       Impact factor: 1.056

2.  Structural studies provide clues for analog design of specific inhibitors of Cryptosporidium hominis thymidylate synthase-dihydrofolate reductase.

Authors:  Vidya P Kumar; Jose A Cisneros; Kathleen M Frey; Alejandro Castellanos-Gonzalez; Yiqiang Wang; Aleem Gangjee; A Clinton White; William L Jorgensen; Karen S Anderson
Journal:  Bioorg Med Chem Lett       Date:  2014-07-24       Impact factor: 2.823

3.  Targeting the TS dimer interface in bifunctional Cryptosporidium hominis TS-DHFR from parasitic protozoa: Virtual screening identifies novel TS allosteric inhibitors.

Authors:  Victor G Ruiz; Daniel J Czyzyk; Vidya P Kumar; William L Jorgensen; Karen S Anderson
Journal:  Bioorg Med Chem Lett       Date:  2020-05-30       Impact factor: 2.823

Review 4.  Targeting purine and pyrimidine metabolism in human apicomplexan parasites.

Authors:  John E Hyde
Journal:  Curr Drug Targets       Date:  2007-01       Impact factor: 3.465

5.  Electrostatic channeling in P. falciparum DHFR-TS: Brownian dynamics and Smoluchowski modeling.

Authors:  Vincent T Metzger; Changsun Eun; Peter M Kekenes-Huskey; Gary Huber; J Andrew McCammon
Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

6.  Automated NMR Assignment and Protein Structure Determination using Sparse Dipolar Coupling Constraints.

Authors:  Bruce R Donald; Jeffrey Martin
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2009-08-01       Impact factor: 9.795

7.  In pursuit of virtual lead optimization: pruning ensembles of receptor structures for increased efficiency and accuracy during docking.

Authors:  Erin S D Bolstad; Amy C Anderson
Journal:  Proteins       Date:  2009-04

8.  In pursuit of virtual lead optimization: the role of the receptor structure and ensembles in accurate docking.

Authors:  Erin S D Bolstad; Amy C Anderson
Journal:  Proteins       Date:  2008-11-15

9.  Structure-based approach to the development of potent and selective inhibitors of dihydrofolate reductase from cryptosporidium.

Authors:  David B Bolstad; Erin S D Bolstad; Kathleen M Frey; Dennis L Wright; Amy C Anderson
Journal:  J Med Chem       Date:  2008-10-04       Impact factor: 7.446

10.  Towards new antifolates targeting eukaryotic opportunistic infections.

Authors:  Jieying Liu; David B Bolstad; Erin S D Bolstad; Dennis L Wright; Amy C Anderson
Journal:  Eukaryot Cell       Date:  2009-01-23
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.