Literature DB >> 16510187

Characterization of synthetic oxomanganese complexes and the inorganic core of the O2-evolving complex in photosystem II: evaluation of the DFT/B3LYP level of theory.

Eduardo M Sproviero1, Jose A Gascon, James P McEvoy, Gary W Brudvig, Victor S Batista.   

Abstract

The capabilities and limitations of the Becke-3-Lee-Yang-Parr (B3LYP) hybrid density functional are investigated as applied to studies of mixed-valent multinuclear oxomanganese complexes. Benchmark calculations involve the analysis of structural, electronic and magnetic properties of di-, tri- and tetra-nuclear Mn complexes, previously characterized both chemically and spectroscopically, including the di-mu-oxo bridged dimers [Mn(III)Mn(IV)(mu-O)(2)(H(2)O)(2)(terpy)(2)](3+) (terpy=2,2':6,2''-terpyridine) and [Mn(III)Mn(IV)(mu-O)(2)(phen)(4)](3+) (phen=1,10-phenanthroline), the Mn trimer [Mn(3)O(4)(bpy)(4)(H(2)O)(2)](4+) (bpy=2,2'-bipyridine), and the tetramer [Mn(4)O(4)L(6)](+) with L=Ph(2)PO(2)(-). Furthermore, the density functional theory (DFT) B3LYP level is applied to analyze the hydrated Mn(3)O(4)CaMn cluster completely ligated by water, OH(-), Cl(-), carboxylate and imidazole ligands, analogous to the '3+1 Mn tetramer' of the oxygen-evolving complex of photosystem II. It is found that DFT/B3LYP predicts structural and electronic properties of oxomanganese complexes in pre-selected spin-electronic states in very good agreement with X-ray and magnetic experimental data, even when applied in conjunction with rather modest basis sets. However, it is conjectured that the energetics of low-lying spin-states is beyond the capabilities of the DFT/B3LYP level, constituting a limitation to mechanistic studies of multinuclear oxomanganese complexes where until now the performance of DFT/B3LYP has raised little concern.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16510187     DOI: 10.1016/j.jinorgbio.2006.01.017

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  17 in total

1.  Functional Models for the Oxygen-Evolving Complex of Photosystem II.

Authors:  Clyde W Cady; Robert H Crabtree; Gary W Brudvig
Journal:  Coord Chem Rev       Date:  2008-02-01       Impact factor: 22.315

Review 2.  Oxidative photosynthetic water splitting: energetics, kinetics and mechanism.

Authors:  Gernot Renger
Journal:  Photosynth Res       Date:  2007-07-24       Impact factor: 3.573

Review 3.  Structure of the Mn4-Ca cluster as derived from X-ray diffraction.

Authors:  Jan Kern; Jacek Biesiadka; Bernhard Loll; Wolfram Saenger; Athina Zouni
Journal:  Photosynth Res       Date:  2007-05-11       Impact factor: 3.573

4.  Computational studies of the O(2)-evolving complex of photosystem II and biomimetic oxomanganese complexes.

Authors:  Eduardo M Sproviero; José A Gascón; James P McEvoy; Gary W Brudvig; Victor S Batista
Journal:  Coord Chem Rev       Date:  2008-02       Impact factor: 22.315

Review 5.  Computational insights into the O2-evolving complex of photosystem II.

Authors:  Eduardo M Sproviero; James P McEvoy; José A Gascón; Gary W Brudvig; Victor S Batista
Journal:  Photosynth Res       Date:  2008-05-16       Impact factor: 3.573

6.  Electrostatic effects on proton coupled electron transfer in oxomanganese complexes inspired by the oxygen-evolving complex of photosystem II.

Authors:  Muhamed Amin; Leslie Vogt; Serguei Vassiliev; Ivan Rivalta; Mohammad M Sultan; Doug Bruce; Gary W Brudvig; Victor S Batista; M R Gunner
Journal:  J Phys Chem B       Date:  2013-05-15       Impact factor: 2.991

Review 7.  The MOD-QM/MM Method: Applications to Studies of Photosystem II and DNA G-Quadruplexes.

Authors:  M Askerka; J Ho; E R Batista; J A Gascón; V S Batista
Journal:  Methods Enzymol       Date:  2016-07-15       Impact factor: 1.600

8.  Enthalpy changes during photosynthetic water oxidation tracked by time-resolved calorimetry using a photothermal beam deflection technique.

Authors:  Roland Krivanek; Holger Dau; Michael Haumann
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

9.  A model of the oxygen-evolving center of photosystem II predicted by structural refinement based on EXAFS simulations.

Authors:  Eduardo M Sproviero; José A Gascón; James P McEvoy; Gary W Brudvig; Victor S Batista
Journal:  J Am Chem Soc       Date:  2008-05-06       Impact factor: 15.419

Review 10.  The MoD-QM/MM methodology for structural refinement of photosystem II and other biological macromolecules.

Authors:  Eduardo M Sproviero; Michael B Newcomer; José A Gascón; Enrique R Batista; Gary W Brudvig; Victor S Batista
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.